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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HXKL1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLMFSSPVV TPALGSFTFS SRPRSNYIVM SAVRSNSAST CPILTKFQKD CATPTPYLRN  60
   61 VANAIADDMR DGLAVEGGGD LEMILTFVDA LPSGNEEGLF YALDLGGTNF RVRSVQLGGK 120
  121 KERVLATESE QISISQKLMI GTSEELFGFI ASKLANFVAK EKPGRFLLEE GRKRELGFTF 180
  181 SFPVKQTSID SGTLSKWTKG FKVSGMEGKN VVACLNEAME AHGLDMRVSA LVNDGVGTLA 240
  241 GARYWDEDVM VGVILGTGTN ACYVEQKHAI PKLRSKSSSG TTIINTEWGG FSKILPQTIF 300
  301 DLEMDETSLN PGEHLYEKMI SGMYLGEIVR RVLLHMCETS DLFGHFAPAK LSTPLALRTE 360
  361 HLCKMQEDNT DDLRDVGSIL YDFLDVEANM NARRRVVEVC DTVVKRGGRL AGAGIVAILE 420
  421 KIEKDTKRMG SGKRTVVAMD GALYEKYPQY RQYMQDALVE LLGHKLASHV AIKHTKDVSG 480
  481 LGAALLAATN SIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle