YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15237698
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDSKKAGG ALPAPATAMG NAAAETSLPP GFRFHPSDEE LISYYLKKKV QGKPMRYDEI  60
   61 GEVDICKLEP WDLAVIIFLC FLALDFRYVL KTRDKEWFFF SALDKKTRTG TSMSRATKQG 120
  121 YWKVTGTDGK IRQGGDGKVT IGTMKTLVFH RGRSPNGLGT DWVMNEYHLA KNDEGVPQNN 180
  181 TGSRYAPFLE EEWDDDNGER VAIHVPDDGP LPLCVLNKEA PLPLIQYKRK RRISSSQTTQ 240
  241 DHRSFTETII DSTASAEPLD ISERIALRAL NGMLDDLEKE QEPVVVDGNK INEIQQESQL 300
  301 QRKKLIDLNL KEDAPSPLCV VNKETPSPLK YMIDDLEKEQ EPATKRINDL VLKENDEIVV 360
  361 FREMQERESM KAEMEISFLE AQIDALDRKI DHPHK

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	395	0.99