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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPNB3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY AAKQLHFNKD  60
   61 GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI VNDGVTVARE VELEDPVENI 120
  121 GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL IAEGVKVVAA GANPVLITRG IEKTTKALVA 180
  181 ELKKMSKEVE DSELADVAAV SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV 240
  241 EGMQFDRGYI SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII 300
  301 AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV IREEVGLQLE 360
  361 KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK NLIEAAEQDY EKEKLNERIA 420
  421 KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK 480
  481 ETLANDEEKV GADIVKKALS YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED 540
  541 LMAAGIIDPT KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle