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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA27_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNFLLVLL WFIVQVSSSH ENGRGDQALS QIDIYAINLA QHHSAFIHVS PLVLGSQGQD  60
   61 TEWVNVVISN PEPSSDDWVG VFSPAKFDSS SCAPTDDKEI APFICSAPVK YMYAKSSPDY 120
  121 MKTGNAVLKF MLINQRADFS FALFTGGLSN PTLVSVSNHV SFINPKAPVY PRLALGKKWD 180
  181 EMTVTWTSGY NIGEAVPFVE WSRKGTRSRR SPAGTLTFTR NSMCGAPART VGWRDPGFIH 240
  241 TASLKDLWPN LKYTYRMGHE LMNGSIVWSK NFTFKSSPYP GQDSLQRVII FGDMGKGERD 300
  301 GSNEYNDYQP GSLNTTDQLI KDLKNIDIVF HIGDITYANG YISQWDQFTA QVEPIASTVP 360
  361 YMVASGNHER DWPDSGSFYG GKDSGGECGV PAETMFDFPA ENKAKFWYSA DYGMFRFCVA 420
  421 DTEHDWREGS EQYQFIERCL ASVDRRAQPW LIFIAHRVLG YSTNDWYGQE GSFEEPMGRE 480
  481 SLQKLWQKYK VDIAFYGHVH NYERTCPIYQ NQCMDNEKSH YSGAFKGTIH VVVGGAGSHL 540
  541 SSFSSLKPKW SIFRDYDYGF VKLTAFDHSS LLFEYKKSSN GAVHDSFTIF REYRDVLACV 600
  601 RDSCEPTTLA S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle