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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PIGM_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRESENTDD EPSKWMKFRS LLVFSMLLRV FLIVYGEWQD AHMEVRYTDV DYIVFSDAAS  60
   61 LMASGESPYK RTTYRYSPLL ALLLTPNSFF HRSWGKFLFS ASDLLVGWFI HKILKQRKVP 120
  121 EKICTYSVMV WLFNPFTFTI GTRGNCEPIV CAMILWIILC LMQGNLLQAA FWYGLVVHFR 180
  181 VYPIIYALPI ILVLDTQVFR SGQKPALLYW NTGQAKTPAS NMERKTFLFN LLTTLKSLFS 240
  241 RERIMFALIS GGVFLACNAV SFYFYGQEFL HEALLYHLTR TDPRHNFSIY FYHIYLHYER 300
  301 QFSAVEKLIS FLPQFTVQFA LVFCFSQDLV FCIFLQTVAF VTFNKVITAQ YFVWFYCLLP 360
  361 LILPWSHMKL KWEGLLCIIM WIGAQTHWLL WGYMLEFKGV NVFLPLWIAS LLFLAANTFV 420
  421 LVRIIQRHRF SPLFRRYESS SSSNNVTKED 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle