YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119360137, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLPLSL PFPLRSLTST TRSLPFQCSP LFFSIPSSIV CFSTQNPDRE EVRWLREEQR  60
   61 WIREEQRWIR EEQRWIRERE SLLQEISDLQ LRIQSLESRN SQLGNSIPDT ISNIAALLQV 120
  121 LKEKNRISES GLSATPMVLE STREQIVEEV EEEEKRVIIA EEKVRVSEPV KKIKRRILKV 180
  181 GSEGDDVQAL QEALLKLGFY SGEEDMEFSS FSSGTASAVK TWQASLGVRE DGVMTAELLQ 240
  241 RLFMDEDVET DKDEASTMKK EEAGNGAVFT SVTQVPEKKQ SIVKDQSDRE VDVTQNRVFL 300
  301 LGENRWEDPS RLIGRNKPVD RSESTNTKTR CITCRGEGRL MCLECDGTGE PNIEPQFMEW 360
  361 VGEDTKCPYC EGLGYTVCDV CDGKKNL

Type	Start	End	Confidence
Signal Peptide	1	23	0.79
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	387	0.98