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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1364218
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRDKYEPAAV SEHGDKKKAK KERDMDELKK EVSMDDHKLS LDELHRKYGT DLNRGLTTAR  60
   61 AAEILARDGP NALTPPPTTP EWVKFCRQLF GGFSMLLWIG AVLCFLAYGI QAATEEEPQN 120
  121 DNLYLGVVLS AVVIITGCFS YYQEAKSSKI MESFKNMVPQ QALVIRNGEK MSINAEEVVV 180
  181 GDLVEVKGGD RIPADLRIIS ANGCKVDNSS LTGESEPQTR SPDFTNENPL ETRNIAFFST 240
  241 NCVEGTARGI VVYTGDRTVM GRIATLASGL EGGQTPIAAE IEHFIHIITG VAVFLGVSFF 300
  301 ILSLILEYTW LEAVIFLIGI IVANVPEGLL ATVTVCLTLT AKRMARKNCL VKNLEAVETL 360
  361 GSTSTICSDK TGTLTQNRMT VAHMWFDNQI HEADTTENQS GVSFDKTSAT WLALSRIAGL 420
  421 CNRAVFQANQ DNLPILKRAV AGDASESALL KCIEVCCGSV KEMRERYAKI VEIPFNSTNK 480
  481 YQLSIHKNAN AGEPRHLLVM KGAPERILDR CSSILIHGKE QPLDEELKDA FQNAYLELGG 540
  541 LGERVLGFCH LMLPDEQFPE GFQFDTDDVN FPVDNLCFVG LISMIDPPRA AVPDAVGKCR 600
  601 SAGIKVIMVT GDHPITAKAI AKGVGIISEG NETVEDIAAR LNIPVSQVNP RDARACVVHG 660
  661 SDLKDMTPEQ LDDILKYHTE IVFARTSPQQ KLIIVEGCQR QGAIVAVTGD GVNDSPALKK 720
  721 ADIGVAMGIA GSDVSKQAAD MILLDDNFAS IVTGVEEGRL IFDNLKKSIA YTLTSNIPEI 780
  781 TPFLIFIIAN IPLPLGTVTI LCIDLGTDMV PAISLAYEQA ESDIMKRQPR NPQTDKLVNE 840
  841 RLISMAYGQI GMIQALGGFF TYFVIMAENG FLPNHLLGIR VTWDDRWIND VEDSYGQQWT 900
  901 YEQRKIVEFT CHTAFFVSIV VVQWADLVIC KTRRNSVFQQ GMKNKILIFG LFEETALAAF 960
  961 LSYCPGMGVA LRMYPLKPTW WFCAFPYSLL IFVYDEVRKL IIRRRPGGWV EKETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle