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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMPL3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTLVTSFA SSSSRFHFRS FSSSPSSLSS CFVRFQFPSR LRLAFAVTPL YSSSRAMAHT  60
   61 ISHATLGLTQ ANSVDHPKIS FSGKEIDVTE WKGDILAVGV TEKDMAKDVN SKFENPILKK 120
  121 LDAHLGGLLA DVSSEEDFSG KPGQSTVLRL PGLGSKRVGL IGLGKSASTP SAFQSLGEAV 180
  181 AAAAKASQAS SVAVVLASSE SVSNESKLCS ASAIASGTVL GLFEDSRYKS ESKKPSLKSV 240
  241 DIIGFGSGPE LEKKLKYAEH VSYGVIFGKE LVNSPANVLT PAVLAEEALN LASMYSDVMT 300
  301 ANILNEEQCK ELKMGSYLAV AAASANPPHF IHLIYKPSSG PVKTKLALVG KGLTFDSGGY 360
  361 NIKTGPGCLI ELMKFDMGGS AAVLGAAKAI GQIKPPGVEV HFIVAACENM ISGTGMRPGD 420
  421 VLTASNGKTI EVNNTDAEGR LTLADALVYA CNQGVDKVVD LATLTGACII ALGTSMAGIY 480
  481 TPSDKLAKEV IAASERSGEK LWRMPMEESY WEMMKSGVAD MVNTGGRAGG SITAALFLKQ 540
  541 FVSEDVEWMH IDMAGPVWNE KKKAATGFGV ATLVEWVQNH SSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle