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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACO3M_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRRATSGVR SASARLSSSL SRIASSETAS VSAPSASSLR NQTNRSKSFS SALRSFRVCS  60
   61 ASTRWSHGGS WGSPASLRAQ ARNSTPVMEK FERKYATMAS EHSYKDILTS LPKPGGGEYG 120
  121 KYYSLPALND PRIDKLPFSV RILLESAIRN CDNYQVTKDD VEKILDWENT STKQVEIAFK 180
  181 PARVILQDFT GVPVLVDLAS MRDAVKNLGS DPSKINPLVP VDLVVDHSIQ VDFARSEDAA 240
  241 QKNLELEFKR NKERFTFLKW GSTAFQNMLV VPPGSGIVHQ VNLEYLGRVV FNSKGFLYPD 300
  301 SVVGTDSHTT MIDGLGVAGW GVGGIEAEAA MLGQPMSMVL PGVVGFKLDG KLKEGVTATD 360
  361 LVLTVTQILR KHGVVGKFVE FYGEGMSELS LADRATIANM SPEYGATMGF FPVDHVTLEY 420
  421 LKLTGRSDET VSMIESYLRA NNMFVDYNEP QQERAYTSYL QLELGHVEPC ISGPKRPHDR 480
  481 VPLKDMKADW HACLDNPVGF KGFAVPKEKQ EEVVKFSYNG QPAEIKHGSV VIAAITSCTN 540
  541 TSNPSVMIGA ALVAKKASDL GLKVKPWVKT SLAPGSRVVE KYLDRSGLRE SLTKQGFEIV 600
  601 GYGCTTCIGN SGNLDPEVAS AIEGTDIIPA AVLSGNRNFE GRVHPQTRAN YLASPPLVVA 660
  661 YALAGTVDID FEKEPIGTRS DGKSVYLRDV WPSNEEVAQV VQYSVLPSMF KSSYETITEG 720
  721 NPLWNELSAP SSTLYSWDPN STYIHEPPYF KNMTANPPGP REVKDAYCLL NFGDSVTTDH 780
  781 ISPAGNIQKT SPAAKFLMDR GVISEDFNSY GSRRGNDEVM ARGTFANIRI VNKLLKGEVG 840
  841 PNTVHIPTGE KLSVFDAASK YKTAEQDTII LAGAEYGSGS SRDWAAKGPL LLGVKAVIAK 900
  901 SFERIHRSNL AGMGIIPLCF KAGEDAETLG LTGHERYTVH LPTKVSDIRP GQDVTVTTDS 960
  961 GKSFVCTLRF DTEVELAYYD HGGILPYVIR SLSAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle