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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK19_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLISFIFL FLFSSITASA QNTFYLYHNC SVTTTFSSNS TYSTNLKTLL SSLSSLNASS  60
   61 YSTGFQTATA GQAPDRVTGL FLCRVDVSSE VCRSCVTFAV NETLTRCPKD KEGVFYYEQC 120
  121 LLRYSNRNIV ATLNTDGGMF MQSARNPLSV KQDQFRDLVL TPMNLAAVEA ARSFKKWAVR 180
  181 KIDLNASQSL YGMVRCTPDL REQDCLDCLK IGINQVTYDK IGGRILLPSC ASRYDNYAFY 240
  241 NESNVGTPQD SSPRPGKGGN SSVIIIAVVV PITVLFLLLV AVFSVRAKNK RTLNEKEPVA 300
  301 EDGNDITTAG SLQFDFKAIE AATNCFLPIN KLGQGGFGEV YKGTLSSGLQ VAVKRLSKTS 360
  361 GQGEKEFENE VVVVAKLQHR NLVKLLGYCL EGEEKILVYE FVPNKSLDHF LFDSTMKMKL 420
  421 DWTRRYKIIG GIARGILYLH QDSRLTIIHR DLKAGNILLD DDMNPKIADF GMARIFGMDQ 480
  481 TEAMTRRVVG TYGYMSPEYA MYGQFSMKSD VYSFGVLVLE IISGMKNSSL YQMDESVGNL 540
  541 VTYTWRLWSN GSPSELVDPS FGDNYQTSEI TRCIHIALLC VQEDAEDRPT MSSIVQMLTT 600
  601 SLIALAEPRP PGFFFRSKQE QAGPSIDSST HCSVDEASIT RVTPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle