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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK11_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSLFSVL CFFFISFGVA SVSAQTCTTD KGTFRPNGTY DVNRRLILSS LPSNVTDQDG  60
   61 LYYNGSIGQQ PNRVYAIGMC IPGSTSEDCS DCIKKESEFF LKNCPNQTEA YSWPGEPTLC 120
  121 YVRYSNTSFS GSADLNPRNW LTNTGDLDSN LTEFTKIWEG LMGRMISAAS TAKSTPSSSD 180
  181 NHYSADSAVL TPLLNIYALM QCTPDLSSGD CENCLRQSAI DYQSCCSQKR GGVVMRPSCF 240
  241 LRWDLYTYSN AFDNLTVASP PPEPPVTVPQ PAGDQDNPTN NDSKGISAGV VVAITVPTVI 300
  301 AILILLVLGF VLFRRRKSYQ RTKTESESDI STTDSLVYDF KTIEAATNKF STSNKLGEGG 360
  361 FGAVYKGKLS NGTDVAVKRL SKKSGQGTRE FRNEAVLVTK LQHRNLVRLL GFCLEREEQI 420
  421 LIYEFVHNKS LDYFLFDPEK QSQLDWTRRY KIIGGIARGI LYLHQDSRLK IIHRDLKASN 480
  481 ILLDADMNPK IADFGLATIF GVEQTQGNTN RIAGTYAYMS PEYAMHGQYS MKSDIYSFGV 540
  541 LVLEIISGKK NSGVYQMDET STAGNLVTYA SRLWRNKSPL ELVDPTFGRN YQSNEVTRCI 600
  601 HIALLCVQEN PEDRPMLSTI ILMLTSNTIT LPVPRLPGFF PRSRQLKLVS EGSESDQYTS 660
  661 KSSSFSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle