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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15236071, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNFFNPSRP SPRPWPNRKK QTDKSAIFLC SVSILVVFFI VVFFITYSEM PKSLFSISAF  60
   61 SGSVQFPQCR SEILTRTLLG QKFLWYAPHS GFSNQLSEFK NALLMAGILN RTLIIPPILD 120
  121 HHAVALGSCP KFRVLSPSEI RISVWNHSIE LLKTDRYVSM ADIVDISSLV SSSAVRVIDF 180
  181 RYFASLQCGV DLETLCTDDL AEQSQAYESL KQCGYLLSGV RGNVDKCLYA VDEDCRTTVW 240
  241 TYKNGEADGR LDSFQPDEKL KKKKKLSNVR RRRDVYKTLG HGTEAESAAI LAFGSLFTAP 300
  301 YKGSELYIDI HKSPKIKSLV EKVDFLPFVR EIMIAGKKFA SETIKAPFLC AQLRLLDGQF 360
  361 KNHRESTFTG LYQKLEALSV KNPGLINVFV MTDLPEFNWT GTYLGDLSKN STNFKLHFIG 420
  421 EQDEFLARTE HELDSASHGQ KFGSIPMSLD SIKKMQTHCY PHGGSNVQLY IEEAVCSCAS 480
  481 LGFVGTPGST IADSVEMMRK YNACSSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle