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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|913778
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAKEPSAS GKSVQQQDQE LVGSNPPQRN WKGIAIALLV ILVICSLIVT SVILLTPAED  60
   61 TSLSQKKKVT VEDLFSEDFK IHDPEAKWIS DKEFIYRERK GSVILRNVET NNSTVLIEGK 120
  121 KIESLRAIRY EISPDKEYAL FSYNVEPVYQ HSHTGYYVLS KIPHGDPQSL DPPEVSNAKL 180
  181 QYAGWGPKGQ QLIFIFENNI YYCAHVGKQA IRVVSTGKEG VIYNGLSDWL YEEEILKSHI 240
  241 AHWWSPDGTR LAYATINDSR VPLMELPTYT GSVYPTVKPY HYPKAGSENP SISLHVIGLN 300
  301 GPTHDLEMMP PDDPRMREYY ITMVKWATST KVAVTWLNRA QNVSILTLCD ATTGVCTKKH 360
  361 EDESEAWLHR QNEEPVFSKD GRKFFFVRAI PQGGRGKFYH ITVSSSQPNS SNDNIQSITS 420
  421 GDWDVTEILT YDEKRNKLYF LSTEDLPRRR HLYSANTVDD FNRQCLSCDL VENCTYVSAS 480
  481 FSHNMDFFLL KCEGPGVPTV TVHNTTDKRR MFDLEANEQV QKAINDRQMP KIEYRKIEVE 540
  541 DYSLPMQILK PATFTDTAHY PLLLVVDGTP GSQSVSERFE VTWETVLVSS HGAVVVKCDG 600
  601 RGSGFQGTKL LHEVRRRLGF LEEKDQMEAV RTMLKEQYID KTRVAVFGLD YGGYLSTYIL 660
  661 PAKGENQGQT FTCGSALSPI TDFKLYASAF SERYLGLHGL DNRAYEMTKL AHRVSALEDQ 720
  721 QFLIIHATAD EKIHFQHTAE LITQLIKGKA NYSLQIYPDE SHYFHSVALK QHLYRSIIGF 780
  781 FVECFRIQDK LPTATAKEDE EED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle