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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLB5_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSSSLHP LCERISHKSY VLRAVDLTIL GLLYSLLLYR ILHISENDNV WLLAFFCESC  60
   61 FSLVWLIFTC LKWSPAEDIP YINTLNERVH DLPSLDMFVP TADTVRESPI ITVNTVLSLL 120
  121 AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFVKIWAPFC KKYNVRVRAP FRYFLNPLVA 180
  181 TDDSVFSKDW KMMKREYVKL CRKVEDATGD SHWLDADDDF EAFSNTKPND HSTIVKVVWE 240
  241 NKGGVGDEKE VPHLVYISRE KRPNYLHHYK TGAMNFLLRV SGLMTNAPYT LNVDCDMYAN 300
  301 EPDVVRQAMC VFLQNSKNSN HCAFVQFPQK FYDSYTNELA VLQSILGRGV AGIQGPFYIG 360
  361 TGCFHTRRVM YGLSSDDLED NGNISQVATR EFLAEDSLVR KYGNSKELVK SVVDALQRKS 420
  421 NPQKSLANLI EAAQEVGHCH YEYQTSWGNL GWMYDSVAED INTSVGIHLR GWTSSFISPD 480
  481 PPAFIGSTPT LGLEAIVQQR RWATGAIEVL FNKQSPFMGM FHGKIKFRQR LAYFWALMCL 540
  541 RSIPELIYCL LPAYCLLHDS ALFPKGPCLC TIVTLVGMHC LYSLWQFMSL GFSVQSWYVV 600
  601 QSLWRIIATS SWLFSIQDII LKLLGISQIG FVIAKKTIPE TKSVYESKPS QGEDDVPKLN 660
  661 LGKFEFDSSG LFIPGTFIML VNLAALAGYL VRLQRSSCSH GGGGSGLAEA CGCILVVMLF 720
  721 LPFLKGLFEH GKYSIPLSTL SKAAFLTVLF VFFCVGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle