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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB15G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA  60
   61 IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD YGLVAYVTQE DVLLGTLTVR 120
  121 ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA 180
  181 LEILTRPQIL FLDEPTSGLD SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF 240
  241 LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE 300
  301 TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK 360
  361 QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD VGYSYTSILA RVSCGGFITG 420
  421 FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL 480
  481 VKFRPGFSHY AFFCLNIFFS VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR 540
  541 LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK 600
  601 VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS 660
  661 LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle