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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AHK4_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRDFVYNNN AMFNPLTTHY SSDMNWALNN HQEEEEEPRR IEISDSESLE NLKSSDFYQL  60
   61 GGGGALNSSE KPRKIDFWRS GLMGFAKMQQ QQQLQHSVAV KMNNNNNNDL MGNKKGSTFI 120
  121 QEHRALLPKA LILWIIIVGF ISSGIYQWMD DANKIRREEV LVSMCDQRAR MLQDQFSVSV 180
  181 NHVHALAILV STFHYHKNPS AIDQETFAEY TARTAFERPL LSGVAYAEKV VNFEREMFER 240
  241 QHNWVIKTMD RGEPSPVRDE YAPVIFSQDS VSYLESLDMM SGEEDRENIL RARETGKAVL 300
  301 TSPFRLLETH HLGVVLTFPV YKSSLPENPT VEERIAATAG YLGGAFDVES LVENLLGQLA 360
  361 GNQAIVVHVY DITNASDPLV MYGNQDEEAD RSLSHESKLD FGDPFRKHKM ICRYHQKAPI 420
  421 PLNVLTTVPL FFAIGFLVGY ILYGAAMHIV KVEDDFHEMQ ELKVRAEAAD VAKSQFLATV 480
  481 SHEIRTPMNG ILGMLAMLLD TELSSTQRDY AQTAQVCGKA LIALINEVLD RAKIEAGKLE 540
  541 LESVPFDIRS ILDDVLSLFS EESRNKSIEL AVFVSDKVPE IVKGDSGRFR QIIINLVGNS 600
  601 VKFTEKGHIF VKVHLAEQSK DESEPKNALN GGVSEEMIVV SKQSSYNTLS GYEAADGRNS 660
  661 WDSFKHLVSE EQSLSEFDIS SNVRLMVSIE DTGIGIPLVA QGRVFMPFMQ ADSSTSRNYG 720
  721 GTGIGLSISK CLVELMRGQI NFISRPHIGS TFWFTAVLEK CDKCSAINHM KKPNVEHLPS 780
  781 TFKGMKAIVV DAKPVRAAVT RYHMKRLGIN VDVVTSLKTA VVAAAAFERN GSPLPTKPQL 840
  841 DMILVEKDSW ISTEDNDSEI RLLNSRTNGN VHHKSPKLAL FATNITNSEF DRAKSAGFAD 900
  901 TVIMKPLRAS MIGACLQQVL ELRKTRQQHP EGSSPATLKS LLTGKKILVV DDNIVNRRVA 960
  961 AGALKKFGAE VVCAESGQVA LGLLQIPHTF DACFMDIQMP QMDGFEATRQ IRMMEKETKE1020
 1021 KTNLEWHLPI LAMTADVIHA TYEECLKSGM DGYVSKPFEE ENLYKSVAKS FKPNPISPSS1080
 1081 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle