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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DNJ13_ARATH
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF  60
   61 QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA DEIKEELERI KRRNEEAKKM 120
  121 AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV 180
  181 ATAILRRQIS PVSSIEFVAS TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW 240
  241 TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS 300
  301 HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS 360
  361 AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL ENMEKTWGQV GEARARAEKA 420
  421 QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS 480
  481 DSGQLKLHEG VKKSGIMGFC DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle