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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLB1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSFSLPP LCERISYTNY FLRAVYLTVL GLFFSLLLHR IRHTSEYDNV WLVAFFCESC  60
   61 FFLVCLLITC LKWSPADTKP FPDRLDERVH DLPSVDMFVP TADPVREPPI MVVDTVLSLL 120
  121 AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNTRVRAP SRYFLKPISV 180
  181 ATEDYEFNRD WEKTKREYEK LRRKVEDATG DSHMLDVEDD FEAFSNTKPN DHSTLVKVVW 240
  241 ENKGGVGDEK EIPHIIYISR EKRPNYVHNQ KCGAMNFLAR VSGLMTNAPY ILNVDCDMYA 300
  301 NDADVVRQAM CILLQESLNM KHCAFVQFRQ EFYDSSTELI VVLQSHLGRG IAGIQGPIYI 360
  361 GSGCVHTRRV MYGLSPDDFE VDGSLSSVAT REFLVKDSLA RRFGNSKEMM KSVVDAIQRN 420
  421 PNPQNILTNS IEAAREVGHC QYEYQTSWGN TIGWLYDSVA EDLNTSIGIH SRGWTSSYIS 480
  481 PDTPAFLGSM PAGVPEALLQ QRRWATGWIE ILFNKQSPLR GLFSKKIRFR QRLAYLCIIT 540
  541 CLRSIPELIY CLLPAYCLLH NSTLFPKGLY LGITVTLVGI HCLYTLWEFM SLGYSVQSWL 600
  601 VSQSVWRIVA TSSWLFSIFD ITLKLLGISE TVFIITKKTV AGTKSALGSG PSQGEDVGPN 660
  661 SDLFKFEFDG SLCFLPGTFI VLVNIAALAV FSVGLQRSSY SHEGGGSGLA EACGCVLVMM 720
  721 LFLPFLMGLF KKGKYGTPLS TLSIAGFLAV LFVVFSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle