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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6946671
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLQLLLQL LLLGKLLLGK TPPTVFGFRL LFAAFRFPLS LHFPHRMHDH FFVRGDTHSC  60
   61 GWKNSTTFTI RISAIYRYLN QCQANEFRCN NGDCIDARKR CNNVSDCSEG EDENEECPAA 120
  121 CSGMEYQCRD GTRCISVSQQ CDGHSDCSDG DDEEHCDGIV PKLRYTCPKG KFTCRDLSCI 180
  181 SIVHRCDGRA DCPNDRSDEE GCPCLYDKWQ CDDGTCIAKE LLCNGNIDCP EDISDERYCE 240
  241 GGYDSEECRF DEFHCGTGEC IPMRQVCDNI YDCNDYSDEV NCVEGEEEDR VGIPIGHQPW 300
  301 RPASKHDDWL HEMDTSEYQV YQPSNVYEKA NSQNPCASNQ FRCTTSNVCI PLHLRCDGFY 360
  361 HCNDMSDEKS CEQYQRHTTT RRPLTLATPT SRITTQGPGL LERRNTTTAT EASRWPWATK 420
  421 TTTIATTTSN PITTVGVANS PPQTCLENIE FACHNRDCIS IESVCDGIPD CGRNEDEDDA 480
  481 LCKCSGDKYK CQRGGGCIPK SQVCDGKPQC HDRSDESACH LHGRLNKTRL GVKCLESQYQ 540
  541 CGDGSCISGY KRCNGIHDCA DASDEYNCIY DYEDTYDTDP NNNPLNECDI LEFECDYSQC 600
  601 LPLEKKCDGY ADCEDMSDEL ECQSYTDHCL ESEFECDSYC LPRDQLCNGI PNCQDGSDER 660
  661 NCTFCREDAY LCNTGECVAD NQRCNGIADC ADGSDERHCA RIYCPPNKLA CNGTCVSRRI 720
  721 KCDGIRDCLD GYDEMYCPET NNHYPTQNVN VIRPKLGPNP IPKSCRPHEW QCANLECIDS 780
  781 SLQCNEIKDC SDGSDEELSV CFGTATTRLK PSDCSPEQFY CDESCYNRSV RCNGHVDCSD 840
  841 GSDEVGCSLP CPQHQCPSGR CYTESERCDR HRHCEDGSDE ANCTAILCKD NEFLCFDRQF 900
  901 CINATQQCDG YYDCRDFSDE QNCIGCYANQ FRCNNGDCVS GSAPCNGYSE CSDHSDELNC 960
  961 GGTQECLPNQ FRCNSGQCVS SSVRCNGRTD CQDSSDEQNC GHRHTEVSQG LETTGVFTTS1020
 1021 TTSTTAMTPL RIICPPTSFK CENGPCISLG LKCNGRVDCP YDGSDEADCG QISNDIDPAD1080
 1081 SNDRRPNQLN LKTYPDSQII KESREVIFRC RDEGPARAKV KWSRPGGRPL PPGFTDRNGR1140
 1141 LEIPNIRVED AGTYVCEAVG YASYIPGQQV TVNLNVERSW GENKYEEIRS NRIRYGTVPH1200
 1201 IDLEFFGLDN DVGSRPESAC TEYQATCMNG ECIDKSSICD GNPDCSDASD EQSCSLGLKC1260
 1261 QPNQFMCSNS KCVDRTWRCD GENDCGDNSD ETSCDPEPSG APCRYNEFQC RSGHCIPKSF1320
 1321 QCDNVPDCTD GTDEVGCMAP LPIRPPPQSV SLLEYEVLEL TCVATGTPTP TIVWRLNWGH1380
 1381 VPDKCESKSY GGTGTLRCPD MRPQDSGAYS CEIINTRGTH FVNPDTIVTV RPVRTDVCEA1440
 1441 GFFNMLARKA EECVQCFCFG VAKACDSANL FTYAIHPPIL SHRVVSVELS PLRQIVINEA1500
 1501 APGQDLLTLL HGVQFRATNV HFSGRETPYL ALPADYMGNQ LKSYGGNLRY EVNYRGSGRP1560
 1561 VNGPDVIITG NRFTLTYRVR TQPGQNNRVS IPFVPGGWQK PDGRKASREE IMMILANVDN1620
 1621 ILIRLGYLDS TAREVDLINI ALDSAGTADK GLGSASLVEK CQCPPGYVGD SCESCASGYV1680
 1681 RQPGGPWLGH CVPFIPDSCP SGTYGDPRRG VPCKECPCPL TGSNNFASGC QQSPDGDVVC1740
 1741 RCNEGYTGRR CEQCAAGYQG NPLAAGGICR RIPDTSCNVD GTYSVHSNGT CQCKDSVIGE1800
 1801 QCDTCKSKSF HLNSFTYTGC IECFCSGVGL DCDSSTWYRD QVTSTFGRSR VDHGFVLVTN1860
 1861 YMQPTPDTVP VSMAAEPNAL SFIGSADQSG NTLYWSLPAA FLGNKLSSYG GKLTYTLSYS1920
 1921 PLPNGIMSRN SAPDVVIKSG EDLRLIHYRK SQVVPSVANT YSVEIKESAW QRGDEVVANR1980
 1981 EHVLMALSDI TAIYIKATYT TSTKEASLRQ VTLDVATPTN LGTPRAVEVE QCRCPEGYLG2040
 2041 LSCEQCAPGY ARDPEGGIYL GLCRPCECNG HSKYCNSDTG DCEECSDNTE GPSCERCAAG2100
 2101 YVGDATRGTI YDCQPDEGYP IPSPPAPGNQ TLECTAYCQI EGIYDCRGNE CLCKRNVIGD2160
 2161 QCDQCRPGTY GLSAQNQDGC KECYCSGLAS QCRSAALYRQ LIPVDFILNA PLITDESGAV2220
 2221 QDTENLIPDI SRNMYTYTHT SYLPKYWSLR GSVLGNQLFS YGGRLSYSLI VESYGNYERG2280
 2281 HDIVLIGNGL KLIWSRPDGN ENQEEYNVRL HEDEQWTRQD RESARPASRS DFMTVLSDLQ2340
 2341 HILIRATPRV PTQSTSIGNV ILESAVTTRT PGATHASDIE LCQCPSGYVG TSCESCAPLH2400
 2401 YRDASGSCSL CPCDVSNTES CDLVSGGYVE CRCKARWKGD RCREIGE

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