YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42570921
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHATSLSHF LILSSSRFSR LGSLTRLLSK PTSLSGSFSS ISVTGQGFRC CCSVATDDTS  60
   61 PSVKKRVVSG VQPTGSVHLG NYLGAIKNWV ALQDTYETLF IIVDHHAATT DTAALYLACG 120
  121 IDVSKASVFV QSHVPAHVEL MWLLCSSTPI GWLQKMIQFK EKSRKEGVEN ASVGLFTYPD 180
  181 LMTADILLYQ SDFVPVGEDQ KQHIELAREI AQRVNHLYGG KKWKKLGGRG GSLFKIPEPL 240
  241 IPQAGARVMS LTDGLSKMSK SAPSDQSRIN LLDSKDLIVD KIKRCKTDSF AGLEFDNAER 300
  301 PECNNLLSIY QIVSGKKKEE VMEECKDMSW GTFKPLLADA LIEHLSPIQA RYQEIIAEPE 360
  361 YLDKILSEGA DRAEELGAVT MRNMYQAMGY YQRRRY

Type	Start	End	Confidence
Signal Peptide	1	22	0.81
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	396	0.96