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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C79B3_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTLASNSSD LTTKSSLGMS SFTNMYLLTT LQALAALCFL MILNKIKSSS RNKKLHPLPP  60
   61 GPTGFPIVGM IPAMLKNRPV FRWLHSLMKE LNTEIACVRL GNTHVIPVTC PKIAREIFKQ 120
  121 QDALFASRPL TYAQKILSNG YKTCVITPFG EQFKKMRKVI MTEIVCPARH RWLHDNRAEE 180
  181 TDHLTAWLYN MVKNSEPVDL RFVTRHYCGN AIKRLMFGTR TFSEKTEADG GPTLEDIEHM 240
  241 DAMFEGLGFT FAFCISDYLP MLTGLDLNGH EKIMRESSAI MDKYHDPIID ERIKMWREGK 300
  301 RTQIEDFLDI FISIKDEAGQ PLLTADEIKP TIKELVMAAP DNPSNAVEWA IAEMINKPEI 360
  361 LHKAMEEIDR VVGKERFVQE SDIPKLNYVK AIIREAFRLH PVAAFNLPHV ALSDTTVAGY 420
  421 HIPKGSQVLL SRYGLGRNPK VWSDPLSFKP ERHLNECSEV TLTENDLRFI SFSTGKRGCA 480
  481 APALGTAITT MMLARLLQGF KWKLAGSETR VELMESSHDM FLSKPLVLVG ELRLSEDLYP 540
  541 MVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle