YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7573508
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRADAFAVS LCVILALLQT MEPVKAEGKY TIVGPGTIHS HRDYNVAVAV HQTKEPVTLK  60
   61 VGITGPSYNK TETVELATAG EFKQITFKLP PLEAGEYNLT AEGVKGLEFK NSTKLNWENF 120
  121 KPYIKIQTDK GKYKPGDTIN YRVIFLDENL RPDTAKDEVV VWFEDSKRNR IKQEKHIKTT 180
  181 GGVYTGKFEL SEFATLGSWS LHVQNGDQHH DGGIYFGGRK QFGGFGHRWH RSDELVNFEV 240
  241 EKYVLPKYSV KMDATQQVSV RDGEFNVVLK ANYTYGKPVN GKVLVNVHLD STSSWENVDG 300
  301 KTVQTDYPGH SVVGTADMVG GKAKLTMDLK DFASYLPHKT SSSYAQITAT VEEDFTGVKL 360
  361 NETGGVQLYP YRYEMSCTDY SSCFSFKPDK EHELNFKITY VDGSLITDTK SVVKAKFTEG 420
  421 IRRNYAFYAF GTDHQEPELP TIEKKTFVFE SHLNASGVAP FKVVLPDLPD IANFTRYYSI 480
  481 ELEFVDEKRD LYTTYPYREP KQIENPSSEE EKEWFRAEVQ RPKDVWNLKI GQEYQVILNS 540
  541 SRPLKYFVYN IVGRGNILET KRVDLAEPQT TVNVTIKPTF LTTPYGRVYF YYVDETGEFR 600
  601 YTEETFSVEV ELQNQIEIKA PAEVKPGADV ALEIKTSPKS FVGLLAVDQS VLLLGSNNDL 660
  661 NKESFNWRLN GYDTSTPWQG GYSYYPGERT GVVTMTNAYF FYNRTAPDYN IQGFGGSSFA 720
  721 MRKTTVAHDS HVFHSGAGGP TQAVGFSAES ASASAAPVVR KNFAETWIFA DIESTEEEVF 780
  781 KWVKTIPDTI TNWVVTGFSL HPQKGLGVTN DQTNIKTFQP FFVSVRLPYS VKRGEVINVP 840
  841 ALVFNYLPKT LDVELTLDNE DQEYDFVDAS NEVIGDQKRT QNIRVGANEA AGASFLIRPK 900
  901 VIGNILLKFK AISPLAGDAI HKPLKVVPEG ITQYQNRAFF INLKDTGEFK NTFELEVPED 960
  961 VVPDSERVEF GLVGDLLGPV VKNLENLLRL PSGCGEQTMS KLVPNYLVRD YLKSIKKLTP1020
 1021 ALDTRIKRNL QDGYQHMLHY RHDDGSFSSF GPTKWRQEDP VRNGSTWLTA YVLRSFSKIK1080
 1081 DIIDLDEHIL AKGYEFLLTR QAENGSFTEH GEYFYSSQRS LLTLTANSLL ALLEEEKPNQ1140
 1141 AAIDKAVAYL SANTAESIEL LPKSIAIYAL QKAKAPEAAK QVASLKSLAK HEDDRTWWTE1200
 1201 DLDKLRASKN CGRWWCWIWS QDVEITSYAL LSLLDSDQET ADSVLNTVRW LIAQRNGFGG1260
 1261 FASSQDTVVG LTALIKFAEK SGYEAAKWEV TVSNKGKREK TEKLNTSEEN DLLLQTVEFP1320
 1321 QGTKSLEFEA KGTGAAMVQI SYQYNLVEKE PKPSFKIQTT VLPESSPANL ELSVCVDYVE1380
 1381 EGESKESNMA ILEVSLPSGY TADEDSFADI RNIERVRLVE TKNGDSVVVI YFENLAKNEE1440
 1441 KCIRIEAYRT HAVANQKPSS VVLYDYYDTN KKATECYSIK SKLCDICEGD DCKSKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle