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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20975690
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISPSVCAAL FSVLVLNSYI AQVQSELSAA EVAGDPSAAQ LLPSSCRNGL NGSSSVPEIR  60
   61 LPFVDMMVRH ERPLFVLREP EEDLLLLLHG HEIFQLHVAT GERRLVPLGY LAGQVSGRRA 120
  121 LGAEVVAWRE FLLLAIVLDD SMEVYQLPKE LLLSEDPATQ VSFEPLQEFS LPGAFLQLHL 180
  181 LKPSGDQVLL LVASNHTRSH SKCRTFEWLD TYFNPLEEIT LPAIRVLQVV GRQPLYIIFG 240
  241 RSLKGSQSKL VLTIYELDRN SRILQQRQAL TVQAQSVQAV RFHGRNCLIA CTSSASASCI 300
  301 FFRMVDGQFV VYRKHARKDL SFRRLSATKK GHLLIGARAN GEVIVFSSTR LDCYSGFQVA 360
  361 GETDPSGLLI HKNLRNETFL LLAYRNSSSD LIRTVQLGGV EEISNQVGAA PDEDLSVVQL 420
  421 HRHEFEESIN ALRGLLLRRR SSTENLRNLV DILKRKSAIH LDTPLHLVQQ GQIGRLQLVD 480
  481 EHLRTPNQLK QRLEELRQRF KAIQTRRTTR SFGTGNENDE PETLKARRLR VGNLIYKGQL 540
  541 ISGHILDNSK PPMLTIRNSP LQTKKLRVNQ LVTPQDFRNS SGAQIAPEET SGSECVVRHL 600
  601 RVEQINGVQW NDFLDSLFLR RRDTSIEGRL VMQSRVRVNS LKTPLLNGLV VDRLFNLRRA 660
  661 QVISSNIYMS AFFAPRLEAQ QVNGLDFAHD VLHRGSNDTW IKTPVRINQM SVSGDIFVGN 720
  721 TSKWQPQPRQ LDDPMEQRLQ QYYTGRVTIR GSLTVTNVLR DTANSLIVLG NQSLARKDIQ 780
  781 STYLLDQTPQ NLTNLTFGHA RVSVPSMTTS YVDGHPVRDH LLSGGQQNQH THPNNTLHII 840
  841 FMNASILGNV ICRDYSSRLA EIAKDAVSHG DAVNITGHKH FQAPLTVQAL QANEINGVPV 900
  901 SEIVVKSNTT QNFTGTKTFA RVVVANDINV HDHLNVSHLN GLPLQQLLGH DISLQRLELT 960
  961 ETPHLENLHF RRLNGLPFDE LLSKISEDGE QPLLLHKQLL IEGNVRFDKA LQVQNINGIQ1020
 1021 WDEYLDRLVR SDSNAEIRGK KTFMADVQIN DALQSPHINN LDLSSLLDNT LLRMTPQQIS1080
 1081 GAYTFDRMMA TNVDVNRING VPKEEFIDTR KDLELKGDLY LKQLNINGSL KFPFVNEAVL1140
 1141 KDLKQRVEQV QQLPWRNLIV TGDALWDGEE QSQSQLDYLR QHAVRRVGNQ TIAGHVLLKE1200
 1201 PYLKDIQSKQ SLPIDLNFTH LAEDALLRRS PTNETQVITA PQELQGLVRA NTLHLEQDAH1260
 1261 FELVNGIDIR RFNASLYRLS SGEAIAADLH FHQAPKIGKL QLEYPEVNGA PIQSIYQQGK1320
 1321 GQSWPPVTFK NLLVEQDLNL KTVNNMNLDY FLQHRIPLKG DALEVFGSLT FEHLQLSGKP1380
 1381 LLRSINGIQL DNLVFRHSNR TQSITGAKTF RGGVEFTGPG HVMNLNGREL SESFRGSIFR1440
 1441 NKDYNIDSLV LDKALFPGGL VLAGLQSQIP NRMRAMEVQS NPLEEFQELL ALGNQTSPRR1500
 1501 LLYLDHDTES LESTWVKGPF RGSSELQVSL PLGYSAPCQR RTLQAKLLIH ERRVLLANSS1560
 1561 VSNQLMRLHS GDIRVKVQNH CHRPARRLRS RIRISCRNET HTLGMRQSVE AMELLEMGEM1620
 1621 VLLLLGTEEE VRVLRLKRSN CSLTDWQSVL PADGRLMKLV RMGVESRQDL ILTSGMSNHR1680
 1681 PVLAIHYRDP LNHNFKMLQL IQGSYDLAEM QGNQLLVSCL GCRHIAIFKR YSHSAEILFE1740
 1741 PIQQLSFQER IQQLTPFKVG NEQYLLVVTQ PEEEHFYLFS YNEVGGWQQR TFGIKKQDQW1800
 1801 AWSLVKSGQM LEAAETPILL LCGKKRECSL VKALLG

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