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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1621440
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAISLEEI KNETVDLEKI PIEEVFEQLK CSREGLTSDE GANRLQIFGP NKLEEKKESK  60
   61 ILKFLGFMWN PLSWVMEMAA IMAIALANGD GKPPDWQDFV GIVCLLVINS TISFIEENNA 120
  121 GNAAAALMAG LAPKTKVLRD GRWSEQEAAI LVPGDIISVK LGDIVPADAR LLEGDPLKID 180
  181 QSALTGESLP VTKNPGDEVF SGSTCKQGEL EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ 240
  241 KVLTAIGNFC ICSIAIGMLV EIIVMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM 300
  301 AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLSVDRSLVE VFTKGVDKEY 360
  361 VLLLAARASR VENQDAIDAC MVGMLADPKE ARAGIREVHF LPFNPVDKRT ALTYIDSNGN 420
  421 WHRASKGAPE QILDLCNCKE DVRRKVHSMI DKYAERGLRS LAVARQEVPE KSKESTGGPW 480
  481 QFVGLLPLFD PPRHDSAETI RRALNLGVNV KMITGDQLAI AKETGRRLGM GTNMYPSASL 540
  541 LGQDKDSSIA SLPVEELIEK ADGFAGVFPE HKYEIVKKLQ ERKHIVGMTG DGVNDAPALK 600
  601 KADIGIAVAD ATDAARGRSD IVLTEPGLSV IISAVLTSRA IFQRMKNYTI YAVSITIRIV 660
  661 FGFMLIALIW KYDFSAFMVL IIAILNDGTI MTISKDRVKP SPMPDSWKLN EIFATGVVLG 720
  721 GYQALMTVIF FWAMHDTSFF TDKFGVKDIR ESDEEMMSAL YLQVSIISQA LIFVTRSRSW 780
  781 SFVERPGALL MIAFLIAQLV ATLIAVYADW TFARVKGCGW GWAGVIWIFS IVTYFPLDIM 840
  841 KFAIRYILSG KAWNNLLDNK TAFTTKKDYG KEEREAQWAL AQRTLHGLQP PEASNLFNEK 900
  901 NSYRELSEIA EQAKRRAEMA RLRELHTLKG HVESVVKLKG LDIETIQQHY TV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle