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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3649741
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGARWRRVP WVSLSCLCLC LLPHVVPGTT EDTLITGSKT PAPVTSTGST TATLEGQSTA  60
   61 ASSRTSNQDI SASSQNHQTK STETTSKAQT DTLTQMMTST LFSSPSVHNV METVTQETAP 120
  121 PDEMTTSFPS SVTNTLMMTS KTITMTTSTD STLGNTEETS TAGTESSTPV TSAVSITAGQ 180
  181 EGQSRTTSWR TSIQDTSASS QNHWTRSTQT TRESQTSTLT HRTTSTPSFS PSVHNVTGTV 240
  241 SQKTSPSGET ATSSLCSVTN TSMMTSEKIT VTTSTGSTLG NPGETSSVPV TGSLMPVTSA 300
  301 ALVTVDPEGQ SPATFSRTST QDTTAFSKNH QTQSVETTRV SQINTLNTLT PVTTSTVLSS 360
  361 PSGFNPSGTV SQETFPSGET TISSPSSVSN TFLVTSKVFR MPISRDSTLG NTEETSLSVS 420
  421 GTISAITSKV STIWWSDTLS TALSPSSLPP KISTAFHTQQ SEGAETTGRP HERSSFSPGV 480
  481 SQEIFTLHET TTWPSSFSSK GHTTWSQTEL PSTSTGAATR LVTGNPSTGA AGTIPRVPSK 540
  541 VSAIGEPGEP TTYSSHSTTL PKTTGAGAQT QWTQETGTTG EALLSSPSYS VTQMIKTATS 600
  601 PSSSPMLDRH TSQQITTAPS TNHSTIHSTS TSPQESPAVS QRGHTQAPQT TQESQTTRSV 660
  661 SPMTDTKTVT TPGSSFTASG HSPSEIVPQD APTISAATTF APAPTGDGHT TQAPTTALQA 720
  721 TPSSHDATLG PSGGTSLSKT GALTLANSVV STPGGPEGQW TSASASTSPD TAAAMTHTHQ 780
  781 AESTEASGQT QTSEPASSGS RTTSAGTATP SSSGASGTTP SGSEGISTSG ETTRFSSNPS 840
  841 RDSHTTQSTT ELLSASASHG AIPVSTGMAS SIVPGTFHPT LSEASTAGRP TGQSSPTSPS 900
  901 ASPQETAAIS RMAQTQRTRT SRGSDTISLA SQATDTFSTV PPTPPSITSS GLTSPQTQTH 960
  961 TLSPSGSGKT FTTALISNAT PLPVTYASSA STGHTTPLHV TDASSVSTGH ATPLPVTSPS1020
 1021 SVSTGHTTPL PVTDASSVST GHPTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle