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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHST2_MOUSE
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSSPRALP PGALPRPLPA APAAVQRALL PPWPRRAGRR WPASPLGMKV FRRKALVLCA  60
   61 GYALLLVLTM LNLLDYKWHK EPLQQCNPDG PLGAAVGAAG AGWGRPGSPP AAPPRAHSRM 120
  121 DPRTPYRPPA AGVGAVPAAA AGSAGAAASL GNATRGTRGG GDKRQLVYVF TTWRSGSSFF 180
  181 GELFNQNPEV FFLYEPVWHV WQKLYPGDAV SLQGAARDML SALYRCDLSV FQLYSPAGSG 240
  241 GRNLTTLGIF GAATNKVVCS SPLCPAYRKE VVGLVDDRVC KKCPPQRLAR FEEECRKYRT 300
  301 VVIKGVRVFD VAVLAPLLKD PALDLKVIHL VRDPRAVASS RIRSRHGLIR ESLQVVRSRD 360
  361 PRAHRMPFLE AAGHKLGAKK EGMGGPADYH ALGAMEVICN SMAKTLQTAL QPPDWLQGHY 420
  421 LVVRYEDLVG DPVKTLRRVY DFVGLLVSPE MEQFALNMTS GSGSSSKPFV VSARNATQAA 480
  481 NAWRTALTFQ QIKQVEEFCY QPMAVLGYER VNSPEEVKDL SKTLLRKPRL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle