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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4105851
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQQYTLLLI YLSVATAKTI TGVFNSFNSL TWSNAATYHY KGPGTPTWNA VLGWSLDGTS  60
   61 ASPGDTFTLN MPCVFKFTTS QTSVDLTAHG VKYATCQFQA GEEFMTFSTL TCTVSNTLTP 120
  121 SIKALGTVTL PLAFNVGGTG SSVDLEDSKC FTAGTNTVTF NDGGKKISIN VDFERSNVDP 180
  181 KGYLTDSRVI PSLNKVSTLF VAPQCANGYT SGTMGFANTY GDVQIDCSNI HVGITKGLND 240
  241 WNYPVSSESF SYTKTCSSNG IFITYKNVPA GYRPFVDAYI SATDVNSYTL SYANEYTCAG 300
  301 GYWQRAPFTL RWTGYRNSDA GSNGIVIVAT TRTVTDSTTA VTTLPFDPNR DKTKTIEILK 360
  361 PIPTTTITTS YVGVTTSYST KTAPIGETAT VIVDIPYHTT TTVTSKWTGT ITSTTTHTNP 420
  421 TDSIDTVIVQ VPSPNPTVTT TEYWSQSFAT TTTITGPPGN TDTVLIREPP NHTVTTTEYW 480
  481 SESYTTTSTF TAPPGGTDSV IIKEPPNPTV TTTEYWSESY TTTSTFTAPP GGTDSVIIKE 540
  541 PPNPTVTTTE YWSQSYTTTT TVTAPPGGTD TVLVREPPNH TVTTTEYWSQ SYTTTTTVIA 600
  601 PPGGTDTVII REPPNHTVTT TEYWSQSYAT TTTITAPPGE TDTVLIREPP NHTVTTTEYW 660
  661 SQSYATTTTI TAPPGETDTV LIREPPNHTV TTTEYWSQSY ATTTTVTAPP GGTDTVLIRE 720
  721 PPNHTVTTTE YWSQSYATTT TVTAPPGGTD TVIIYDTMSS SEISSFSRPH YTNHTTLWST 780
  781 TWVIETKTIT ETSCEGDKGC SWVSVSTRIV TIPNNIETPM VTNTVDSTTT ESTSQSPSGI 840
  841 FSESGVSVET ESSTVTTAQT NPSVPTTESE VEFTTKGNNG NGPYESPSTH VKSSMDENSE 900
  901 FTTSTAASTS TDIENATIAT TGSVEASSPI ISSSADETTT ITTTAESTSV IEQPTNNNGG 960
  961 GKAPSATSSP STTTTANNDS VITGTTSTNQ SQSQSQSNSD TQQTTLSQQM TSSLVSLHML1020
 1021 TTFDGSGSVI QHSTWLCGLI TLLSLFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle