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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5514629
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVELEEEEE RICLRTAEEG QLANMDDDKL VSDEVHLRQL SATPSSAFSL QHSRGSDTKE  60
   61 EAPPEGGTMG GKSAAPREEG EPDERVVLRR AVDKGAIALA QIDDLKLEGD DDDEAVVNGE 120
  121 EVDGLGLSNP AAQTTDDEQI TVNGTGAAAT SSVAADAASS EQDAASTAMA TPDMSKIPRL 180
  181 PGDGAQMEDN GSGDLPPSLR ASTTSILSNL RKKQQGGPLR GGVAKQTPLR VQSVRIVEAK 240
  241 RAYGPKRRTE SCSIFGNSNF EHDLESGNSI ASIAGQSQRP LNNEMYSAFK SGNVVKGILC 300
  301 PSLTNSFKQS SLERSYLTYT HRQRQKSLII VNVVDFVLKI VLAFVWIMRR SELGPIESDD 360
  361 GTSMATAITW SVCCGIANMA ICFLGYWRCF ANNYLHWAAV CTWVLFNIQG FVGQGVGFAD 420
  421 REYLVWYILF VIFVPYAMLP LPLKWCVVGG TITASCHLAV ITIIKLQHGE ATINPECVLF 480
  481 QIFANFILYT AINVAGMYTK YLTDRGQRLA FIETHKAMEH KKESEKELQR TQKLLDSILP 540
  541 NIVNNQIRSE MYKGTDPTVE TQFNKLYVYP MDNVSILFAD IKGFTELASK TSAQQLVKIL 600
  601 NDLFARFDRI AEDNHCLRVK LLGDCYYCVS QFESDNWKTR PDHAVCSVET GLHMIKAIKD 660
  661 VRLHTHVDLN MRIGIHSGSV MCGVLGNKKW HFDVWSNDVI IANHMESGGI PGRVHISEAT 720
  721 LKCLNDAYEV EPGNGGCRDN HLKMLNVKTY LIKRTEPLRP KRRFGTRSSA HLAGSVATAA 780
  781 PPCATPTALP KSISASGSGS IGGVTATGND GASIDGRSLE YAATIAVPAQ QPTQLLQQQQ 840
  841 KKNISLNSLP NVVEGVAMDS RRIRNGCGVM GGAGGTGGGG TGPCGMSTVS SPTAMMSAPL 900
  901 EVQLRPRNGA CSIQNLAEAI DGKGLIIEDE STTDWIPEIP FKNLNSPEDG LNRADSILVD 960
  961 TKEDHRVSVA VLDEEIDEFI EQNIQINSNK EIRREYLNPW TLKFKDKSQE QKFCQLREDM1020
 1021 FRSNMLCVFV IWIFMVLCQV IIIPRCTRLI ICLSVGTVIL TFCCVLVMAE EFPGLPRCLK1080
 1081 TNSAKLVHQR QRRTLFICGV IVSMCMLSAI GLVLCPSSTY IGTADEHSRF LRMVSPYSNT1140
 1141 SMTEKEFKLN VYLSATIHHN ITISTPASGG PTPLVDITSS GPSDEFVRST LNALTLNLTP1200
 1201 PLPQSHRPYT LTTNGHSVSL SNLSYSDASV MQSSSDVEGQ CAHPEYLVFT WVLCLVSLAT1260
 1261 ALKLYYLVKA LMALAMVAFY TTLIMMKFGS GDSFSLVELS RLGMPLGVQM LILLISFLVM1320
 1321 VCYHARLVEV TSRLDFIWKE QAERELTNMK SNRALNDTLI KNILPDHVAT YYLSDEHTDE1380
 1381 LYSKMHNLCG VMFASIPNFQ DFYSEDIDNG KACIRILNEI ICDFDELLEE PRFASVEKIK1440
 1441 TVGATYMAAA GLNHEHLRLR GETSEDSVCD LVEFAFAMKQ KLEEINGDAF NNFQLRVGIC1500
 1501 SGPLVSGVIG ARKPVYDIWG NTVNVASRMD STGENWRVQV PENTAELLCS RGYTCVKRGE1560
 1561 IAVKGKGMMT TFYVHPKGIS ESQLISPVRM PAGIPLAQTP NLQRQTSHHG SFSAVVFGML1620
 1621 QASKRSTAIA GTPTGTPSPQ IRRGHRGSTF SSVRLSQKST TVNPVRRNTT RVRGRSYRQK1680
 1681 KSSSNNSIVT QASSSYMPSF RRIDQIETTI SKSHNDAL

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