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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13591555
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAATLAAV AAIVENIATN SGAPGKNASF RSSTYVQLPG PESDEKKQLE RELAALVIRV  60
   61 QQLETRANAA PATIFPDTPN ETAHSLFGDD SSSPTSSSSG REPKRLKSAS STTRNGFTTD 120
  121 GRPSKLNAIT DEELEGLREH VDGQSRLLDS QRAELDGVNA QLLEQKQLQE RALAIIEQER 180
  181 VATLERELWK HQKANEAFQK ALREIGSIVT AAARGDLSKR VKINPIEMDP EITTFKRTMN 240
  241 AMMDQLGVFS SEVSRVAREV GTEGILGGQA QIEGVDGTWK ELTDNVNVMA QNLTDQVREI 300
  301 ASVTTAVAHG DLTQKIESAA KGEILQLQQT INTMVDQLRT FASEVTRVAR DVGTEGMLGG 360
  361 QADVEGVKGM WNELTVNVNA MANNLTTQVR DIINVTTAVA KGDLTQKVQA ECRGEIFELK 420
  421 NTINSMVDQL QQFAREVTKI AREVGTEGRL GGQATVHDVQ GTWRDLTENV NGMAMNLTTQ 480
  481 VREIANVTSA VAAGDLSKKI RVEVKGEILD LKNTINTMVD RLGTFAFEVS KVARAVGTDG 540
  541 TLGGQAQVEN VEGKWKDLTE NVNTMASNLT SQVRGISTVT QAIANGDMSR KIDVEAKGEI 600
  601 LILKETINNM VDRLSIFCNE VQRVAKDVGV DGIMGGQADV AGLKGRWKEI TTDVNTMANN 660
  661 LTAQVRAFGD ITNAATDGDF TKLVEVEASG EMDELKRKIN QMVYNLRDSI QRNTQAREAA 720
  721 ELANKTKSEF LANMSHEIRT PMNGIIGMTQ LTLDTDLTQY QREMLNIVNN LAMSLLTIID 780
  781 DILDLSKIEA KRMVIEEIPY TLRGTVFNAL KTLAVKANDK FLDLTYRVDS SVPDHVIGDS 840
  841 FRLRQIILNL VGNAIKFTEH GEVSLTIQKG NDVTCLPNEY MIEFVVSDTG IGIPTDKLGL 900
  901 IFDTFQQADG SMTRKFGGTG LGLSISKRLV NLMGGDVWVK SQYGKGSSFY FTCRVRLADV 960
  961 DISLIRKQLK PYKGHQVLFI DKGKTGHGPE VGQMLGQLGL VPIVLESEQN HTLTRVRGKE1020
 1021 CPYDVIVVDS IDTARRLRGI DDFKYLPIVL LAPTVHVSLK SCLDLGITSY MTMPCKLIDL1080
 1081 GNGMVPALEN RATPSLSDNT KSFEILLAED NTVNQRLAVK ILEKYNHVVT VVSNGAEALE1140
 1141 AVKDNKYDVI LMDVQMPVMG GFEATAKIRE YERSLGTQRT PIIALTAHAM MGDREKCIEA1200
 1201 QMDEYLSKPL QQNHLIQTIL KCATLGGALL EQNRERELEL ARHAEHKGGL STDPARASSV1260
 1261 MRPPLHHRPV TTAESLSGGA ESPSLMANDG EDPIQRARSS LSEPGCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle