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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16444944
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METNPRKLRS YSYIWLIVCI FVLVVCAILS RAEEKQGKDE NNDHIPKIYS VLVEGEPLAF  60
   61 RASTNINSKA MALEAKKIEE IHEEILGSTL EKGSYTKLYS FKHVINAFAV RTTASQAKKL 120
  121 RKTKGVKAVE EDKGVKLMTT YTPDFLELPQ QVWPKISNEG DRRAGEDIVI GFVDTGINPT 180
  181 HPSFAALDLT NPYSSNISRL HFSGDCEIGP LFPPGSCNGK IISARFFSAG ARASGALSSS 240
  241 LDILSPFDAS GHGSHVASIA AGNAGVPVII DGFFYGRASG MAPRARIAVY KAIYPSIGTL 300
  301 VDVIAAIDQA IMDGVDVLTL SVGPDEPPVD KPTVLGIFDL AMLLARKAGV FVVQAVGNNG 360
  361 PSPSSVLSYS PWVVGVAAGN TDRSYPASLI LDGGQTVQGV GLSGPTLGAP LVQHRLVLAK 420
  421 DAVRTNGSVL QPLTRDIEEC QRPENFDPAA VFGSIVICTF SDGFYNQMST VLAITQTART 480
  481 LGFMGFILIA NPRFGDYVAE PVIFSAPGIL IPTVSAAQII LRYYEEKTFR DTRGVATQFG 540
  541 ARARIDEGRN SIFAGQAPVV SRFSSRGPAF IDANRSPLDV LKPDILAPGH QIWGAWSLPS 600
  601 AFDPILTGRS FAILSGTSMA TPHIAGIGAL IKQLNPSWTP AMIASAISTT ANEYDSTGEI 660
  661 ISAEYYELSR LFPSNHFDHG AGHVNPARAL DPGLVLPAGF EDYISFLCSL PNISPATIRD 720
  721 ATGVLCTTTL SHPANLNHPS VTISALKESL VVRRSFQNVS NKTETYLGSV LPPNGTTVRL 780
  781 TPTWFTVPPQ KTQDLDIEFN VTQVLNKFTF GEVVLTGSLN HIIRIPLSVK TI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle