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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7839387
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKLAKVAL NSSNVATESN IKNNKLLANL SAAGAATATT ATTGTATTTT ATTANQALNF  60
   61 NNKTKATANA TAASANNRHN NNNNSSAIKK HTNTNKLAGK SPACNSSSSS LSSSSSSNSS 120
  121 ESKDTNFEYE DEWNIGGIPE LLDDLDADIE KSAHSSGGGN QATALNAKQA NSSSTSSSSS 180
  181 SKGGASSSSS SAAATGSSSS HKSHKTTLHS NLSATSPTTI KFTRQPVAIG GANSSSSSSA 240
  241 AAAPSGGSAN VVAKGSSSSS SSTSSSSSGK HHHHHHHHSN SSSSGSSSKG YKSALVAQLN 300
  301 SPSPLNSNSK SLSGSGSGSG NTNGAAGAGA GSTLSSSTFA GFSKGGSLVS SSAGAAAALA 360
  361 AGSGQQGSKF SAGGMSSQTG SGSGGNNTSN SNNSSSGSGG SGSGSSTGNT ASGSGNNNST 420
  421 SAGGPPSSQG GNNGNGSGSS SSSSSGKSSA KMSIDHQATL DKGLKMKIKR TKPGTKSSEA 480
  481 KHEIVKATDQ QQNGALGAGS NNSANEDGSS GSSSTNASSL GSTNSSSSAS SGSSSSSGSS 540
  541 SSSSKKHLNN ASSGSGSSSS GGGSQNNASG HASGGGSSGS SQSTPQGTKR GSSGHRREKT 600
  601 KDKNAHSNRM SVDKSAAAAS AAGEKDTPEK CSGTGAGGSP CSCNGDVGAP CSHHACIRRA 660
  661 AHMSNSAGNA NSSAGTGQSG GSSSMSAVPP GVFTPSAGSP STGSPSTVVP AAASLLAATG 720
  721 AASSSASQMA SSSAGGVGGS GGGANAPGPP GKESAGSIKI SSHIAAQLAA AAASNSYSGS 780
  781 GANTNQGQNS NAGGNGGSES KAAAAAQAKL MAPGMISATM HHTISVPAGT GTGDDDTKSP 840
  841 PAKRVKHEAG ASGAGGGKEM VDICIGTSVG TITEPDCLGP CEPGTSVTLE GIVWHETEGG 900
  901 VLVVNVTWRG KTYVGTLLDC TRHDWAPPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle