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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109503982, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQAAAAAQ AAAAAQAAAA QAAQAEAAES WYLALLGFAE HFRTSSPPKI RLCVHCLQAV  60
   61 FPFKPPQRIE ARTHLQLGSV LYHHTKNSEQ ARSHLEKAWL ISQQIPQFED VKFEAASLLS 120
  121 ELYCQENSVD AAKPLLRKAI QISQQTPYWH CRLLFQLAQL HTLEKDLVSA CDLLGVGAEY 180
  181 ARVVGSEYTR ALFLLSKGML LLMERKLQEV HPLLTLCGQI VENWQGNPIQ KESLRVFFLV 240
  241 LQVTHYLDAG QVKSVKPCLK QLQQCIQTIS TLHDDEILPS NPADLFHWLP KEHMCVLVYL 300
  301 VTVMHSMQAG YLEKAQKYTD KALMQLEKLK MLDCSPILSS FQVILLEHII MCRLVTGHKA 360
  361 TALQEISQVC QLCQQSPRLF SNHAAQLHTL LGLYCVSVNC MDNAEAQFTT ALRLTNHQEL 420
  421 WAFIVTNLAS VYIREGNRHQ ELYSLLERIN PDHSFPVSSH CLRAAAFYVR GLFSFFQGRY 480
  481 NEAKRFLRET LKMSNAEDLN RLTACSLVLL GHIFYVLGNH RESNNMVVPA MQLASKIPDM 540
  541 SVQLWSSALL RDLNKACGNA MDAHEAAQMH QNFSQQLLQD HIEACSLPEH NLITWTDGPP 600
  601 PVQFQAQNGP NTSLASLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle