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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3882147
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASDRAEGRPA KPSKTAAREK TEGAVAAVGG GPSSFRCCYG CCHEARLGRT SLPRGVIMLT  60
   61 EASLSIWGWG SLGIVLFLIT FGPFVIFYLT FYILCFVGGG LVVTLLFGKT NSEKYLEQCE 120
  121 HSFLPPTSPG VPKCLEEMKR EARTIKIDRR LTGANIIDEP LQQVIQFSLR DYVQYWYYTL 180
  181 SDDESFLLEI RQTLQNALIQ FATRSKEIDW QPYFTTRIVD DFGTHLRVFR KAQQKITEKD 240
  241 DQVKGTAEDL VDTFFEVEVE MEKEVCRDLV CTSPKDEEGF LRDLCEVLLY LLLPPGDFQN 300
  301 KIMRYFVREI LARGILLPLI NQLSDPDYIN QYVIWMIRDS NCNYEAFMNI IKLSDNIGEL 360
  361 EAVRDKAAEE LQYLRSLDTA GDDINTIKNQ INSLLFVKKV CDSRIQRLQS GKEINTVKLA 420
  421 ANFGKLCTVP LDSILVDNVA LQFFMDYMQQ TGGQAHLFFW MTVEGYRVTA QQQLEVLLSR 480
  481 QRDGKHQTNQ TKGLLRAAAV GIYEQYLSEK ASPRVTVDDY LVAKLADTLN HEDPTPEIFD 540
  541 DIQRKVYELM LRDERFYPSF RQNALYVRML AELDMLKDPS FRGSDDGDGE SFNGSPTGSI 600
  601 NLSLDDLSNV SSDDSVQLHA YISDTVYADY DPYAVAGVCN DHGKTYALYA ITVHRRNLNS 660
  661 EEMWKTYRRY SDFHDFHMRI TEQFESLSSI LKLPEKKTFN NMDRDFLEKR KKDLNAYLQL 720
  721 LLAPEMMKAS PALAHYVYDF LENKAYSKGK GDFARKMDTF VNPLRNSMRN VSNAVKSLPD 780
  781 SLAEGMTKMS DNMGKMSERL GQDIKQSFFK VPPLIPKTDS DPEHRRVSAQ LDDNVDDNIP 840
  841 LRVMLLLMDE VFDLKERNQW LRRNIKNLLQ QLIRATYGDT INRKIVDHVD WMTSPEQVAD 900
  901 SVKRFRDAFW PNGILAEAVP CRDKSIRMRT RVAGKTKLLA IMPGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle