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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14133249
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPGGAISLSV EAKAGADLLV KGKQARMDIY DTQTLGVVVF GGFMVVSAIG IFLVSTFSMK  60
   61 ETSYEEALAN QRKEMAKTHH QKVEKKKKEK TVEKKGKTKK KEEKPNGKIP DHDPAPNVTV 120
  121 LLREPVRAPA VAVAPTPVQP PIIVAPVATV PAMPQEKLAS SPKDKKKKEK KVAKVEPAVS 180
  181 SVVNSIQVLT SKAAILETAP KEVPMVVVPP VGAKGNTPAT GTTQGKKAEG TQNQSKKAEG 240
  241 APNQGRKAEG TPNQGKKTEG TPNQGKKAEG TPNQGKKAEG TPNQGKKAEG AQNQGKKVDT 300
  301 TPNQGKKVEG APTQGRKAEG AQNQAKKVEG AQNQGKKAEG AQNQGKKGEG AQNQGKKAEG 360
  361 AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKVEG 420
  421 AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQDKKAEG 480
  481 AQNQGRKAEG AQNQGRKAEG AQNQGKKAEG APNQGKKAEG APNQGKKAEG TPNQGKKAEG 540
  541 TPNQGKKAEG TPNQGKKAEG AQNQGKKAEG AQNQGKKAEG TPNQGKKAEG AQNQGKKAEG 600
  601 AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKAEG AQNQGKKVEG AQNQGKKAEG 660
  661 AQNQGKKAEG AQNQGKKAEG AQNQGQKGEG AQNQGKKTEG AQGKKAERSP NQGKKGEGAP 720
  721 IQGKKADSVA NQGTKVEGIT NQGKKAEGSP SEGKKAEGSP NQGKKADAAA NQGKKTESAS 780
  781 VQGRNTDVAQ SPEAPKQEAP AKKKSGSKKK GEPGPPDADG PLYLPYKTLV STVGSMVFNE 840
  841 GEAQRLIEIL SEKAGIIQDT WHKATQKGDP VAILKRQLEE KEKLLATEQE DAAVAKSKLR 900
  901 ELNKEMAAEK AKAAAGEAKV KKQLVAREQE ITAVQARMQA SYREHVKEVQ QLQGKIRTLQ 960
  961 EQLENGPNTQ LARLQQENSI LRDALNQATS QVESKQNAEL AKLRQELSKV SKELVEKSEA1020
 1021 VRQDEQQRKA LEAKAAAFEK QVLQLQASHR ESEEALQKRL DEVSRELCHT QSSHASLRAD1080
 1081 AEKAQEQQQQ MAELHSKLQS SEAEVRSKCE ELSGLHGQLQ EARAENSQLT ERIRSIEALL1140
 1141 EAGQARDAQD VQASQAEADQ QQTRLKELES QVSGLEKEAI ELREAVEQQK VKNNDLREKN1200
 1201 WKAMEALATA EQACKEKLHS LTQAKEESEK QLCLIEAQTM EALLALLPEL SVLAQQNYTE1260
 1261 WLQDLKEKGP TLLKHPPAPA EPSSDLASKL REAEETQSTL QAECDQYRSI LAETEGMLRD1320
 1321 LQKSVEEEEQ VWRAKVGAAE EELQKSRVTV KHLEEIVEKL KGELESSDQV REHTLHLEAE1380
 1381 LEKHMAAASA ECQNYAKEVA GLRQLLLESQ SQLDAAKSEA QKQSDELALV RQQLSEMKSH1440
 1441 VEDGDIAGAP ASSPEAPPAE QDPVQLKTQL EWTEAILEDE QTQRQKLTAE FEEAQTSACR1500
 1501 LQEELEKLRT AGPLESSETE EASQLKERLE KEKKLTSDLG RAATRLQELL KTTQEQLARE1560
 1561 KDTVKKLQEQ LEKAEDGSSS KEGTSV

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