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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4589536
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRRRRPASPP AGLALAPRSP SASPEPREGE TLSPSMQREE GFNTKMADGP DEYDTEAGCV  60
   61 PLLHPEEIKP QSHYNHGYGE PLGRKTHIDD YSTWDIVKAT QYGIYERCRE LVEAGYDVRQ 120
  121 PDKENVTLLH WAAINNRIDL VKYYISKGAI VDQLGGDLNS TPLHWATRQG HLSMVVQLMK 180
  181 YGADPSLIDG EGCSCIHLAA QFGHTSIVAY LIAKGQDVDM MDQNGMTPLM WAAYRTHSVD 240
  241 PTRLLLTFNV SVNLGDKYHK NTALHWAVLA GNTTVISLLL EAGANVDAQN IKGESALDLA 300
  301 KQRKNVWMIN HLQEARQAKG YDNPSFLRKL KADKEFRQKV MLGTPFLVIW LVGFIADLNI 360
  361 DSWLIKGLMY GGVWATVQFL SKSFFDHSMH SALPLGIYLA TKFWMYVTWF FWFWNDLNFL 420
  421 FIHLPFLANS VALFYNFGKS WKSDPGIIKA TEEQKKKTIV ELAETGSLDL SIFCSTCLIR 480
  481 KPVRSKHCGV CNRCIAKFDH HCPWVGNCVG AGNHRYFMGY LFFLLFMICW MIYGCISYWG 540
  541 LHCETTYTKD GFWTYITQIA TCSPWMFWMF LNSVFHFMWV AVLLMCQMYQ ISCLGITTNE 600
  601 RMNARRYKHF KVTTTSIESP FNHGCVRNII DFFEFRCCGL FRPVIVDWTR QYTIEYDQIS 660
  661 GSGYQLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle