YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9082270
Protein type: Transmembrane
Type Confidence: 0.44
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS  60
   61 SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN KDAYPFDEII YCNIGNPQSL 120
  121 GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK 180
  181 GLRDAIADGI EARDGFPADP NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA 240
  241 SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE 300
  301 NQRDVVNFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK 360
  361 GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG QILASLIMSP PKPGDDSYES 420
  421 YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA 480
  481 PDNFYCKRLL KATGIVVVPG SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE 540
  541 FRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle