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View Structure Prediction Details

Protein: Corin-PB, FBpp03...
Organism: Drosophila melanogaster
Length: 1397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Corin-PB, FBpp03....

Description E-value Query
Range
Subject
Range
gi|7304194, gi|2... - gi|7304194|gb|AAF59230.1| CG2105-PA, isoform A [Drosophila melanogaster], gi|24586299|ref|NP_610297....
683.0 [0..1] [1397..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNALDMNKQF LSVSQDHQHQ TSVADQRSRS RSERASSLAL PLNSLLDFYD KQQEQCKSVT  60
   61 LLPLPSNSGS ISESSSLSSS NSIVRRHSSH YYPMLEDKQK PSQLPQAATE MLVNMTEQKY 120
  121 CQSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQGASIAGGR QVHHQQQHLV RVDTPVTPPP PIPRRLLRGK SAWQASSPHP LPLSAGGQDG  60
   61 AHGTGTGTVF VYPQPENVTA EAVVRGSGDG QGGGGAGLQS ALLVDIATRP ASGYADADGI 120
  121 SDDDRMSLEN SVFDESLTST PVKVAGYLAG RYAGLSHMAK RAQRSSSSTV DSAYGSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGGHSERFAS SSTSVDFRSR FSSVDTQSSL DEKPLSSSID SPLARDPRDA YRERAVLNDA  60
   61 MHKLNNNNTS LGLALYSASN NNNGSSVASD GSQLPVVPAR KQPPPVKGSS NSSNSIG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [419-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETQSQSSKEP SSVSASASTS SAASAGSSTI SSGTMSSMSG PCPAVVPPTD AITKRPGPPE  60
   61 PPLRQANVFD PVETGSRGHP PPPLTVRNKL GRNKPPPITY PRMQQRQDST LSSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [533-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYSISSSPGY NSKLMEAPLL GSQQGGRKSN APGSAQRQTP LMDLAPTRFL GGAGGGTGSG  60
   61 KQGPAMPPPR SKINFRQDST ISSDSFSQTS SPGYNPKLME APL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [636-758]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPSLSAKRLC SAPAPIVCRQ GVQHEPIEEL EPPQTISPLH KAAGQPSSLQ TIVRFQNGAP  60
   61 HTMSLQHQII NRRKSSNPYI TNGRLKFRLF QILINAFALL AIAGGLAAYF NAYPTIKFVN 120
  121 KTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2eroA
Description: No description for 2eroA was found.

Predicted Domain #7
Region A:
Residues: [759-1397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INTIHVEDTT SFGKNPAPGT CLPIIVRFCQ GPQIPYNYTV FPNYIGHFGQ LETQTDLDSY  60
   61 EALVDVRCYE LVSLFLCTLF VPKCGQSGAT VPPCKTLCTE TMRRCGFFFD VFGLSLPEYL 120
  121 NCKLFKDFPS SEDCVGLDEV REVMRAATHP KCDGFQCDQN RCLPQEYVCD GHLDCMDQAD 180
  181 EAKCERCGPD EIYCGDSQCI GTKHICDGII DCPYGQDERN CLRLSERNGD VGTGVLEVYR 240
  241 IGQRQWMPAC VKNWDRAVSP SAVCSILGYS AVNATSVLTQ LTHRPLLATV NVSTDIWKMY 300
  301 AKRKSTLMQE FANCKKTEDY PMADLTCSNY ECGRVKRGRH KPSRRIIGGT QASPGNWPFL 360
  361 AAILGGPEKI FYCAGVLISD QWVLTASHCV GNYSVIDLED WTIQLGVTRR NSFTYSGQKV 420
  421 KVKAVIPHPQ YNMAIAHDND IALFQLATRV AFHEHLLPVC LPPPSVRNLH PGTLCTVIGW 480
  481 GKREDKDPKS TYEYIVNEVQ VPIITRNQCD EWLDNLTVSE GMVCAGFDDG GKDACQGDSG 540
  541 GPLLCPYPGE KNRWFVGGIV SWGIMCAHPR LPGVYANVVQ YVPWIQEQIA KHSRPIKEDR 600
  601 VNKYDLHPGG PDILSKIATD PMREGAPHHY THSRTSSKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.30103
Match: 2f83A
Description: No description for 2f83A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle