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View Structure Prediction Details

Protein: FBpp0087706
Organism: Drosophila melanogaster
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0087706.

Description E-value Query
Range
Subject
Range
gi|90017718, gi|... - gi|90017718|ref|NP_001035001.1| AMP-activated protein kinase beta 1 non-catalytic subunit [Gallus ga...
277.0 [0..1] [220..40]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNNEEEEEA AVGAEPATGS QLTGDEDDIR KTALPTVLRW DGGGKNVTIS GTFSDWKPMA  60
   61 MVRSHQNFVT IIDLPEGDHQ YKFCVDGEWK HDPKLKSVEN AEGQRNNLVS VRESDFEVFQ 120
  121 ALAKDSENV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1z0nA
Description: the glycogen-binding domain of the AMP-activated protein kinase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [130-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNYAEKEYSQ EVPQVKPWEK VSGPPVLPPH LLQVILNKDT PLSCEPTLLP EPNHVMLNHL  60
   61 YALSIKDGVM VLSATHRYRK KYVTTLLYKP I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.154902
Match: 2v8qB
Description: No description for 2v8qB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle