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View Structure Prediction Details

Protein: Eb1-PE
Organism: Drosophila melanogaster
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eb1-PE.

Description E-value Query
Range
Subject
Range
FBpp0305157, Eb1... - The gene Eb1 is referred to in FlyBase by the symbol Dmel\Eb1 (CG3265, FBgn0027066). It is a protein...
gi|220949000, gi... - gi|220958162|gb|ACL91624.1| Eb1-PA [synthetic construct], gi|220949000|gb|ACL87043.1| Eb1-PA [synthe...
500.0 [0..1] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNVYSTNV TSENLSRHDM LAWVNDCLQS QFSKIEELCT GAAYCQFMDM LFPNSVPVKR  60
   61 VKFRTNLEHE YIQNFKILQA GFKKMSVDKI IPIDKLVKGR FQDNFEFLQW FKKFFDANYD 120
  121 GRDYDASAVR EGAPMGFGSG AVKSLPGTAA SGVSSSYRRG PSATTRPAMT SAVKPISKVL 180
  181 PRTNNAAPAS RINACANSTG TVKKNDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 1wyoA
Description: Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [208-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSVNNQQIE EMSNQVMDMR INLEGLEKER DFYFSKLRDI EILCQEADDA EAHPIIQKIL  60
   61 DILYATEDGF APPDDAPPED EEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.39794
Match: 1txqB
Description: Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle