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View Structure Prediction Details

Protein: Adf1-PC
Organism: Drosophila melanogaster
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Adf1-PC.

Description E-value Query
Range
Subject
Range
gi|58081956 - gi|58081956|emb|CAD62679.1| Adf-1 protein [Scaptodrosophila lebanonensis]
227.0 [0..1] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTLTAAIEM DKLDANLEQQ FDLNLIEAVK LNPVIYDRSH YNYKHFVRKA QTWKQIAETL  60
   61 GVPEQKCTKR WKSLRDKFAR EMKLCQESRW RYFKQMQFLV DSIRQYRESL LGKCANGSQS 120
  121 ANQVADPSQQ QQAQQQTVVD IFAQPFNGSA TTSAQALTHP HEITVTSDAQ LATAVGKDQK 180
  181 PYFYEPPLKR ERSEEEHSDN MLNTIKIFQN NVSQAVSAED QSFGMVVTDM LNTLGVRQKA 240
  241 EAKVHIIKYL TDMQLLAQHN KY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.989
Match: 1ignA
Description: DNA-binding domain of rap1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle