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View Structure Prediction Details

Protein: CG31352-PA
Organism: Drosophila melanogaster
Length: 806 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31352-PA.

Description E-value Query
Range
Subject
Range
gi|73970462 - gi|73970462|ref|XP_531880.2| PREDICTED: similar to Zinc finger protein 208 [Canis familiaris]
675.0 [0..2] [591..382]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKQKIYCAK CTKKCSGEVL RVADNHFHKA CFQCCQCKKS LATGGFFTKD NAYYCIPDYQ  60
   61 RLYGTKCANC QQYVEGEVVS TMGKTYHQKC FTCSKCKQPF KSGSKVTNTG KEVLCEQCVT 120
  121 GA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.38
Match: 2dfyX
Description: No description for 2dfyX was found.

Predicted Domain #2
Region A:
Residues: [123-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVSPSRQATG GGVSSPAPPA ESPTRATAHQ QHGSVISHKA HLKEDYDPND CAGCGELLKE  60
   61 GQALVALDRQ WHVSCFRCKA CQAVLNGEYM GKDAVPYCEK CYQKGFGVKC AYCSRFISGK 120
  121 VLQAGDNHHF HPTCARCTKC GDPFGDGEEM YLQGSAIWHP RCGPGPSESG IILNGGGGTS 180
  181 SVVGGASNGN FTDTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.045757
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #3
Region A:
Residues: [318-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDRMSSSALS EMYIRSRTPS FNGSLYSSSR KHYRTVSPGL ILREYGRPNA EDISRIYTYS  60
   61 YLTDAPHYLR K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 2gliA
Description: Five-finger GLI1
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [389-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIDPYDKTPL SPHFHRPSSY ATTASNAGSV AGSRPPSRPH SRTRSAMKVL VDAIRSETPR  60
   61 PKSPGMNNEE PIELSHYPAA KKPPPGEQPK IERDDFPAPP YPYTDPERRR RYSDTYKGVP 120
  121 ASDDEDENVE NGKPNGKVKN GEEQQRLQRE AEQLEKLNSG IGSAIAKDLK EHAKYRKWKQ 180
  181 NN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [571-671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDPRNASRTP SASKEPLYKL RYESPIGASP SRNLDHQKPF YEDEMFDRST SYRGSLGKSL  60
   61 GNAPSYNAIH SYRSPPKPGY GFKTTTLPYI RNGFSSDFSY G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [672-806]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLGDKTHSTD LSCGKSEASV DSITEGDRRA LMGGDLPASS TYSGALSYHY PQAGLIRRSL  60
   61 PNMSHSMLVH EPAKIYPYHL LLITNYRLPS DVDRCNLERH LSDIEFEHIL QCARSEFYRL 120
  121 PQWRRNELKR RVKLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 1ujsA
Description: Solution structure of the Villin headpiece domain of human actin-binding LIM protein homologue (KIAA0843 protein)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle