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View Structure Prediction Details

Protein: Pi4KIIalpha-PC, ...
Organism: Drosophila melanogaster
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pi4KIIalpha-PC, ....

Description E-value Query
Range
Subject
Range
gi|20269870, gi|... - gi|20269870|gb|AAM18079.1|AF498318_1 phosphatidylinositol 4-kinase type II alpha [Drosophila melanog...
944.0 [0..1] [709..1]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGARDQTDP PLLQLEDEVD LIGDFAKDQP PPRNQLSPLL NGFESTSNQL TTKVEINTVG  60
   61 MGKRKTRRRG KKAREPMLLS VDDEDDEEEA QEERNHTNGL PPGEESAGGD AVIQKPQLDN 120
  121 LVMHYDDQID DEDGEEAVLL KRSSNPRNQR LKGSAEDSID SSSQQPPIIC HIAPAKVASS 180
  181 ALTSPLKTTS HTALARHPHD EADDICLVPE IDFEGMSTDA GSDNRESQPL LGGGNASHGS 240
  241 RISELLGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [249-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGRGHDHVEF VSNTFGDDPL FSEIVAKAEG AIENGVLPER IYQGSSGSYF VKDASHQCLA  60
   61 VFKPKDEEPY GRLNPKWTKW MHKLCCPCCF GRACLIPNQG YLSESGASLV DRKLNLNVVP 120
  121 KTRVVRLVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [378-529]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESFNYARIDR QKAKLKKRIK EHYPSAHFNR MSLPLKTGSF QLFVEGYKDA DYWLRRFESE  60
   61 PLPPSVAKSF QLQFERLVVL DYIIRNTDRG NDNWLIKYVA PKITTQVGGT GGRTMHGVVT 120
  121 PKLPNALGAS KIVDLNEPPQ ASPKPTTGGR PS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [530-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHLAGGAATS AQQDSSSLAS SEDEPSSRSP PTSEPDWNVV NSAFIRIAAI DNGLAFPFKH  60
   61 PDSWRAYPYH WAWLPQAKIP FSEEIKEQVL PQLSDMNFVE EICTELLYLF QQDRGFDKRL 120
  121 FERQMSVMRG QILNLTQALR DGKSPVQLVQ MPAVIVERSS GSRFFSFTQR FQNKSPFFSW 180
  181 C

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle