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View Structure Prediction Details

Protein: Rhp-PB, Rhp-PA
Organism: Drosophila melanogaster
Length: 718 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rhp-PB, Rhp-PA.

Description E-value Query
Range
Subject
Range
gi|50731906 - gi|50731906|ref|XP_418410.1| PREDICTED: similar to RHPN1 protein [Gallus gallus]
537.0 [0..29] [704..5]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKEHELST RVVKNEENED DEKLNELSFC FVRGSDPRAA TCRSKLQNRR CKLNKEINKE  60
   61 LRLRAGAENL YKATSNRKLR DTVALELSFV NSNLQLLKEQ LAELNSSVEI YQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 1cxzB
Description: Effector domain of the protein kinase pkn/prk1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [113-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SESHNGIMPM IPLGLKETKE INFMEPFSDF ILEHYSEEPS MYIDAIADMT DTRQASKTPS  60
   61 RDALGVALLF RYYNTLYYVE RRFFPPDRNL GVYFEWYDSL TGVPSCQRTI AFEKACTLFN 120
  121 LGGIYTQIGA RHDRTTERGL DLAVDSFLRA AGVFRHIYDT FTNAPSMDLK PQVLDVLVSL 180
  181 MLSQARECLF EKLQLQIEAM SHDCQAFRDL AGEAAQISHE YNEMHKNIQA NDTHTYLPEC 240
  241 WAGLVPVKAE LYKAFAHFYK ARSIDATDEL KASKSSQKNQ ESFIGNSQEV ERITTADYGA 300
  301 SDEASTSIAN KLAHLKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 2oevA
Description: No description for 2oevA was found.

Predicted Domain #3
Region A:
Residues: [430-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALASIEEAQR LQRMCRFLKN KASLTEVMKE VHSKSQEELE KFRLQASAKN IEDGDLLERS  60
   61 VEASSKFTLS LTGPDFTSHK VKDPFKRLGP IAIFSARR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.54
Match: 1zb1A
Description: Structure basis for endosomal targeting by the Bro1 domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [528-718]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HWTAPRCVRL QKGSSLYHSV PSNDNKCPLD NDDDEEHDGG YNLYKEEFEN FGFHVRGDAP  60
   61 VIIAHVEINS LADLGGIKEG DFIVEIAGVD VKWYSHQQVV QLIQSCGSTL ELRVITPMDR 120
  121 NYLKPLSSKG SLSTLSAASS SGISSGFPSP TSIAAKPKLH LKTSSSSRPA GSVSSSSWNP 180
  181 FRRTPSLAKI F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1z87A
Description: solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle