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View Structure Prediction Details

Protein: CG12065-PF, CG12...
Organism: Drosophila melanogaster
Length: 641 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12065-PF, CG12....

Description E-value Query
Range
Subject
Range
CG12065-PB, CG12... - This gene is referred to in FlyBase by the symbol Dmel\CG12065 (CG12065, FBgn0030052). It is a prote...
768.0 [0..1] [641..1]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERRSHIQM APPPPPPKPN KSQTANGNGI GNGTGIGTGT GNGTLPNGNK NYNKIVAVQD  60
   61 QEPLAQNSSG VQRSQSPPRT EQVVMTPRGK TANSTVILIE RKLVDEINDR VHVAGGDHTG 120
  121 IIINKDTVAG QKSASKAAAL SLEFRVFLVS ANTGKHSQES RTLRFWFRDW LTNEEKQAHI 180
  181 AQDFFKELVS PQDFPRDY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [199-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGFIKKIMKL LQHGYSEIQS IEIELRILEE TSAPPSRPLS LEESQFESPP LTQEKVLELI  60
   61 EQAYPNPVSP EDLAKDYGWS EQDVLLVIKS LQERGLIKSM EYNAYTRIHH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDKEIKVVKQ MPTIASNKQP TIAIITAQYC EKLAVDAMLE NKETFVRYTT VGESNVYTLG  60
   61 NIGAHRIVST KLPSVGSNRE AMTATGNTTT RLLGTFQKVD YVFIVGVAGG VPHYTDYKKH 120
  121 VRLGDVVISY VDKQRALISN SKEKPYVYLY KSGEDVKTYF PVNDSLQQIA ESLQANMQVK 180
  181 RPWEDYLNQA QQALAQKTDA DFNRPDARTD KLFMNIGNNE VIEVAHPIAA DEVDGVNRLR 240
  241 LHLGPIGSGR DLVRSDELRT QFARKYGLLA TDVEMSSVLD SIIGNCRESF ILVKGIADYK 300
  301 DGTSTRKWQN FAAISAASVV KSVICGMDAP TNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 1zosA
Description: No description for 1zosA was found.

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Created and Maintained by: Michael Riffle