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View Structure Prediction Details

Protein: UBE2Q1
Organism: Homo sapiens
Length: 422 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBE2Q1.

Description E-value Query
Range
Subject
Range
gi|76612076 - gi|76612076|ref|XP_886921.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2Q isoform 4 [Bos t...
0.0 [40..422] [40..426]
UB2Q1_MOUSE - Ubiquitin-conjugating enzyme E2 Q1 OS=Mus musculus GN=Ube2q1 PE=1 SV=2
gi|157823617, gi... - gi|183985973|gb|AAI66534.1| Ubiquitin-conjugating enzyme E2Q family member 1 [Rattus norvegicus], gi...
0.0 [40..422] [40..422]
UBE2Q2 - ubiquitin-conjugating enzyme E2Q family member 2
0.0 [41..422] [6..375]
gi|109016815 - gi|109016815|ref|XP_001111833.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2Q [Macaca mula...
0.0 [7..422] [19..440]
gi|114658247 - gi|114658247|ref|XP_001145531.1| PREDICTED: ubiquitin-conjugating enzyme E2Q (putative) 2 isoform 4 ...
0.0 [41..422] [6..375]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPQPQGQQ QPGPGQQLGG QGAAPGAGGG PGGGPGPGPC LRRELKLLES IFHRGHERFR  60
   61 IASACLDELS CEFLLAGAGG AGAGAAPGPH LPPRGSVPGD PVRIHCNITE SYPAVPPIWS 120
  121 VESDDPNLAA VLERLVDIKK GNTLLLQHLK RIISDLCKLY NLPQHPDVEM LDQPLPAEQC 180
  181 TQEDVSSEDE DEEMPEDTED LDHYEMKEEE PAEGKKSEDD GIGKENLAIL EKIKKNQRQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.3
Match: 2ebkA
Description: No description for 2ebkA was found.

Predicted Domain #2
Region A:
Residues: [240-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYLNGAVSGS VQATDRLMKE LRDIYRSQSF KGGNYAVELV NDSLYDWNVK LLKVDQDSAL  60
   61 HNDLQILKEK EGADFILLNF SFKDNFPFDP PFVRVVSPVL SGGYVLGGGA ICMELLTKQG 120
  121 WSSAYSIESV IMQISATLVK GKARVQFGAN KSQYSLTRAQ QSYKSLVQIH EKNGWYTPPK 180
  181 EDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1zuoA
Description: Structure of Human Ubiquitin-Conjugating Enzyme (UBCi) Involved in Embryo Attachment and Implantation
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle