YRC Public Data Repository - Protein Structure Prediction

Protein:	ELOVL5
Organism:	Homo sapiens
Length:	299 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELOVL5.

Description	E-value	Query Range	Subject Range
gi\|73973376 - gi\|73973376\|ref\|XP_852962.1\| PREDICTED: similar to homolog of yeast long chain polyunsaturated fatty...	0.0	[1..299]	[173..471]
gi\|114607848 - gi\|114607848\|ref\|XP_527417.2\| PREDICTED: homolog of yeast long chain polyunsaturated fatty acid elon...	0.0	[1..299]	[125..423]
gi\|50744984 - gi\|50744984\|ref\|XP_426204.1\| PREDICTED: similar to fatty acid elongase 1 [Gallus gallus]	0.0	[1..299]	[546..840]
gi\|26337211 - gi\|26337211\|dbj\|BAC32290.1\| unnamed protein product [Mus musculus]	1.0E-96	[1..299]	[1..299]
ELOV5_RAT - Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus GN=Elovl5 PE=1 SV=1	5.0E-96	[1..299]	[1..299]
ELOV5_MACFA - Elongation of very long chain fatty acids protein 5 OS=Macaca fascicularis GN=ELOVL5 PE=2 SV=1	7.0E-96	[1..299]	[1..299]
ELOV5_BOVIN - Elongation of very long chain fatty acids protein 5 OS=Bos taurus GN=ELOVL5 PE=2 SV=1	2.0E-95	[1..299]	[1..299]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFDASLST YFKALLGPRD TRVKGWFLLD NYIPTFICSV IYLLIVWLGP KYMRNKQPFS  60
   61 CRGILVVYNL GLTLLSLYMF CELVTGVWEG KYNFFCQGTR TAGESDMKII RVLWWYYFSK 120
  121 LIEFMDTFFF ILRKNNHQIT VLHVYHHASM LNIWWFVMNW V

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [162-299]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCGHSYFGAT LNSFIHVLMY SYYGLSSVPS MRPYLWWKKY ITQGQLLQFV LTIIQTSCGV  60
   61 IWPCTFPLGW LYFQIGYMIS LIALFTNFYI QTYNKKGASR RKDHLKDHQN GSMAAVNGHT 120
  121 NSFSPLENNV KPRKLRKD

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits