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View Structure Prediction Details

Protein: NCAPH
Organism: Homo sapiens
Length: 741 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCAPH.

Description E-value Query
Range
Subject
Range
gi|559715 - gi|559715|dbj|BAA07556.1| HCAP-H [Homo sapiens]
1046.0 [0..1] [741..7]
gi|114578898 - gi|114578898|ref|XP_001148661.1| PREDICTED: barren isoform 4 [Pan troglodytes]
1042.0 [0..1] [741..1]
gi|67972290 - gi|67972290|dbj|BAE02487.1| unnamed protein product [Macaca fascicularis]
1039.0 [0..1] [741..1]
CND2_MOUSE - Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=1 SV=1
968.0 [0..9] [741..6]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPGPALPA TMNNSSSETR GHPHSASSPS ERVFPMPLPR KAPLNIPGTP VLEDFPQNDD  60
   61 EKERLQRRRS RVFDLQFSTD SPRLLASPSS RSIDISATIP KFTNT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QITEHYSTCI KLSTENKITT KNAFGLHLID FMSEILKQKD TEPTNFKVAA GTLDASTKIY  60
   61 AVRVDAVHAD VYRVLGGLGK DAPSLEEVEG HVADGSATEM GTTKKAVKPK KKHLHRTIEQ 120
  121 NINNLNVSEA DRKCEIDPMF QKTAASFDEC STAGVFLSTL HCQDYRSELL FPSDVQTLST 180
  181 GEPLEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [292-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PELGCVEMTD LKAPLQQCAE DRQICPSLAG FQFTQWDSET HNESVSALVD KFKKNDQVFD  60
   61 INAEVDESDC GDFPDGSLGD DFDANDEPDH TAVGDHEEFR SWKEPCQVQS CQEEMISLGD 120
  121 GD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [414-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRTMCPLLSM KPGEYSYFSP RTMSMWAGPD HWRFRPRRKQ DAPSQSENKK KSTKKDFEID  60
   61 FEDDIDFDVY FRKTKAATIL TKSTLENQNW RATTLPTDFN YNVDTLVQLH LKPGTRLLKM 120
  121 AQGHRVETEH YEEIEDYDYN NPNDTSN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [561-741]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FCPGLQAADS DDEDLDDLFV GPVGNSDLSP YPCHPPKTAQ QNGDTPEAQG LDITTYGESN  60
   61 LVAEPQKVNK IEIHYAKTAK KMDMKKLKQS MWSLLTALSG KEADAEANHR EAGKEAALAE 120
  121 VADEKMLSGL TKDLQRSLPP VMAQNLSIPL AFACLLHLAN EKNLKLEGTE DLSDVLVRQG 180
  181 D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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