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View Structure Prediction Details

Protein: YNAA_ECOLI
Organism: Escherichia coli
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNAA_ECOLI.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
202.0 [0..2] [332..2354]
gi|87116410 - gi|87116410|dbj|BAE79361.1| myosin heavy chain embryonic type 1 [Cyprinus carpio]
160.0 [0..14] [332..1375]
gi|4249701 - gi|4249701|gb|AAD13772.1| myosin heavy chain [Rana catesbeiana]
160.0 [0..14] [332..267]
gi|116062143 - gi|116062143|dbj|BAF34702.1| fast skeletal myosin heavy chain isoform mMYH-2 [Oryzias latipes]
159.0 [0..14] [332..1379]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQTSRLAI IIDSTGAKNN ADNLTSSLVK MTQAGETAAN SAGKVTKATE DEKNALAKLK  60
   61 AAIDPVGAAI DTVGRRYSEL KKFFDKGLID KEEYEFLVRK LNETTEELSG VAQAQREAEK 120
  121 AGKLAAAQQE AQAQAFQRML DKIDPLAAAL RNLEQQHDEL NAAFASGKIN GSQFENYSRK 180
  181 IQETRRELTG EAQAEREAAK AHDEQVVALQ RLIAQLDPVG TAFNRLVEQQ KQLNEAKAKG 240
  241 MLSPEMYEEL SGKLRAMRSE LEVTQSQLSK TGMSAKQTAF AMRMLPAQMT DIVVGLSTGQ 300
  301 SPFMVLMQQG GHSAMQETRI ASLPVTAIPA GMKIPCVTAG SA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle