YRC Public Data Repository - Protein Structure Prediction

Protein:	YJDJ_ECOLI
Organism:	Escherichia coli
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJDJ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|117647889, gi... - gi\|88932207\|ref\|ZP_01137899.1\| putative acetyltransferase [Acidothermus cellulolyticus 11B], gi\|8891...	100.0	[0..1]	[84..65]
gi\|68184783, gi\|... - gi\|91772131\|ref\|YP_564823.1\| N-acetylglutamate synthase [Methanococcoides burtonii DSM 6242], gi\|917...	99.0	[0..2]	[84..33]
gi\|54025829, gi\|... - gi\|54025829\|ref\|YP_120071.1\| N-acetylglutamate synthase [Nocardia farcinica IFM 10152], gi\|54017337\|...	97.0	[0..1]	[84..58]
gi\|7514445 - pir\|\|A70418 conserved hypothetical protein aq_1359 - Aquifex aeolicus gi\|15606556, gi\|... - gi\|2983780\|gb\|AAC07339.1\| hypothetical protein aq_1359 [Aquifex aeolicus VF5], gi\|15606556\|ref\|NP_21...	96.0	[0..3]	[81..47]
gi\|19918465, gi\|... - gi\|20093127\|ref\|NP_619202.1\| acetyltransferase [Methanosarcina acetivorans C2A], gi\|19918465\|gb\|AAM0...	95.0	[0..2]	[80..33]
gi\|48836152 - ref\|ZP_00293149.1\| COG1246: N-acetylglutamate synthase and related acetyltransferases [Thermobifida ... gi\|72163278, gi\|... - gi\|72163278\|ref\|YP_290935.1\| N-acetylglutamate synthase [Thermobifida fusca YX], gi\|71917010\|gb\|AAZ5...	94.0	[0..1]	[84..39]
gi\|20905469, gi\|... - gi\|21227137\|ref\|NP_633059.1\| acetyltransferase [Methanosarcina mazei Go1], gi\|20905469\|gb\|AAM30731.1...	94.0	[0..2]	[80..41]
gi\|108769508, gi... - gi\|108799089\|ref\|YP_639286.1\| N-acetylglutamate synthase [Mycobacterium sp. MCS], gi\|108769508\|gb\|AB... gi\|92915760, gi\|... - gi\|92915760\|ref\|ZP_01284382.1\| GCN5-related N-acetyltransferase [Mycobacterium sp. KMS], gi\|92439958... gi\|92907164, gi\|... - gi\|92907164\|ref\|ZP_01275944.1\| GCN5-related N-acetyltransferase [Mycobacterium sp. JLS], gi\|92435464...	93.0	[0..1]	[86..30]
gi\|47095205, gi\|... - gi\|47095205\|ref\|ZP_00232817.1\| acetyltransferase, GNAT family [Listeria monocytogenes str. 1/2a F685... gi\|153192775, gi... - gi\|254913259\|ref\|ZP_05263271.1\| YjdJ protein [Listeria monocytogenes J2818], gi\|153192775\|ref\|ZP_019... gi\|153184498, gi... - gi\|254899538\|ref\|ZP_05259462.1\| YjdJ protein [Listeria monocytogenes J0161], gi\|153184498\|ref\|ZP_019... gi\|133731677, gi... - gi\|254937640\|ref\|ZP_05269337.1\| YjdJ protein [Listeria monocytogenes F6900], gi\|153181159\|ref\|ZP_019...	93.0	[0..1]	[90..1]
gi\|48841031, gi\|... - gi\|73668132\|ref\|YP_304147.1\| acetyltransferase [Methanosarcina barkeri str. Fusaro], gi\|72395294\|gb\|...	92.0	[0..2]	[80..41]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIREGHNKF YINDKQGKQI AEIVFVPTGE NLAIIEHTDV DESLKGQGIG KQLVAKVVEK  60
   61 MRREKRKIIP LCPFAKHEFD KTREYDDIRS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.30103
Match:	1r57A
Description:	NMR Solution Structure of a GCN5-like putative N-acetyltransferase from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR31
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.58334675412488	bayes_pls_golite062009
transferase activity	1.42100058377634	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.36161355811542	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.25235725303625	bayes_pls_golite062009
acyltransferase activity	1.22254853169399	bayes_pls_golite062009
N-acyltransferase activity	0.871199269314283	bayes_pls_golite062009
acetyltransferase activity	0.816872100224547	bayes_pls_golite062009
N-acetyltransferase activity	0.530135080983537	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: