YRC Public Data Repository - Protein Structure Prediction

Protein:	YIAH_ECOLI
Organism:	Escherichia coli
Length:	331 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIAH_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|68536583, gi\|... - gi\|68536583\|ref\|YP_251288.1\| hypothetical protein jk1497 [Corynebacterium jeikeium K411], gi\|6826418...	205.0	[0..3]	[328..355]
YRHL_BACSU - Putative peptidoglycan O-acetyltransferase YrhL OS=Bacillus subtilis (strain 168) GN=yrhL PE=3 SV=1 YRHL_BACSU - Putative peptidoglycan O-acetyltransferase YrhL OS=Bacillus subtilis GN=yrhL PE=3 SV=1 gi\|221319894 - gi\|221319894\|ref\|ZP_03601188.1\| hypothetical protein BsubsJ_14663 [Bacillus subtilis subsp. subtilis... gi\|221324174 - gi\|221324174\|ref\|ZP_03605468.1\| hypothetical protein BsubsS_14802 [Bacillus subtilis subsp. subtilis... gi\|221314972 - gi\|221314972\|ref\|ZP_03596777.1\| hypothetical protein BsubsN3_14747 [Bacillus subtilis subsp. subtili...	174.0	[0..3]	[327..9]
gi\|52784410, gi\|... - gi\|52784410\|ref\|YP_090239.1\| YrhL [Bacillus licheniformis ATCC 14580], gi\|52346912\|gb\|AAU39546.1\| Yr...	173.0	[0..3]	[327..9]
gi\|68197381, gi\|... - gi\|68234999\|ref\|ZP_00574044.1\| Acyltransferase 3 [Frankia sp. EAN1pec], gi\|68197381\|gb\|EAN11708.1\| A...	168.0	[0..4]	[330..316]
gi\|72162102, gi\|... - gi\|72162102\|ref\|YP_289759.1\| hypothetical protein Tfu_1701 [Thermobifida fusca YX], gi\|71915834\|gb\|A...	166.0	[0..2]	[330..20]
gi\|153166668, gi... - gi\|153166668\|ref\|ZP_01927191.1\| hypothetical protein LMHG_01470 [Listeria monocytogenes FSL N1-017],... gi\|226223893, gi... - gi\|226223893\|ref\|YP_002758000.1\| acyltransferase [Listeria monocytogenes Clip81459], gi\|225876355\|em... gi\|46880785, gi\|... - gi\|46907517\|ref\|YP_013906.1\| acyltransferase family protein [Listeria monocytogenes str. 4b F2365], ... gi\|255520557 - gi\|255520557\|ref\|ZP_05387794.1\| acyltransferase [Listeria monocytogenes FSL J1-175] gi\|254879496 - gi\|254879496\|ref\|ZP_05252206.1\| acyltransferase [Listeria monocytogenes FSL J2-071] gi\|254852657 - gi\|254852657\|ref\|ZP_05242005.1\| acyltransferase [Listeria monocytogenes FSL R2-503] gi\|254824649 - gi\|254824649\|ref\|ZP_05229650.1\| acyltransferase [Listeria monocytogenes FSL J1-194]	159.0	[0..2]	[328..9]
gi\|66044117, gi\|... - gi\|66044117\|ref\|YP_233958.1\| acyltransferase 3 [Pseudomonas syringae pv. syringae B728a], gi\|6325482...	158.0	[0..4]	[327..11]
gi\|111221221, gi... - gi\|111221221\|ref\|YP_712015.1\| hypothetical protein FRAAL1777 [Frankia alni ACN14a], gi\|111148753\|emb...	158.0	[0..4]	[324..173]
gi\|28270530, gi\|... - gi\|28377697\|ref\|NP_784589.1\| acyltransferase (putative) [Lactobacillus plantarum WCFS1], gi\|28270530...	157.0	[0..2]	[326..25]

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Predicted Domain #1

Region A:
Residues: [1-177]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPKIYWIDN LRGIACLMVV MIHTTTWYVT NAHSVSPVTW DIANVLNSAS RVSVPLFFMI  60
   61 SGYLFFGERS AQPRHFLRIG LCLIFYSAIA LLYIALFTSI NMELALKNLL QKPVFYHLWF 120
  121 FFAIAVIYLV SPLIQVKNVG GKMLLVLMAV IGIIANPNTV PQKIDGFEWL PINLYIN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [178-331]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDTFYYILYG MLGRAIGMMD TQHKALSWVS AALFATGVFI ISRGTLYELQ WRGNFADTWY  60
   61 LYCGPMVFIC AIALLTLVKN TLDTRTIRGL GLISRHSLGI YGFHALIIHA LRTRGIELKN 120
  121 WPILDIIWIF CATLAASLLL SMLVQRIDRN RLVS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits